Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 GNRHR2P1-201ENST00000555315 631 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC090616.5-202ENST00000582111 297 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC005730.3-201ENST00000583067 366 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 MIR3662-201ENST00000637030 95 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 AL133383.2-201ENST00000622958 2336 ntBASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.06□□□□□ -1.76
SSX2IPQ9Y2D8 ZNF680P1-201ENST00000436625 1469 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 RNU1-18P-201ENST00000363062 164 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 SNORD56.2-201ENST00000363242 71 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 RNY3P3-201ENST00000363816 102 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 HMGN2P8-201ENST00000391458 268 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 OR1AA1P-201ENST00000419597 916 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 RPL23AP30-201ENST00000432419 501 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL606489.2-201ENST00000433886 234 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 CKS1BP5-201ENST00000434172 273 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 BNIP3P2-201ENST00000441221 577 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 RN7SL330P-201ENST00000469709 307 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC025465.4-201ENST00000513422 638 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 RNU2-10P-201ENST00000516375 211 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 RNU4-60P-201ENST00000517239 135 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC022695.1-201ENST00000522089 237 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL133271.1-201ENST00000538229 291 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL133153.1-201ENST00000557756 303 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC034105.3-201ENST00000565294 442 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 GLUD1P4-201ENST00000590914 418 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC007179.3-201ENST00000604976 235 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL158211.4-201ENST00000606988 584 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC069234.5-201ENST00000611056 416 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 YWHAEP7-203ENST00000622054 312 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL773545.4-201ENST00000637262 310 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AL513478.4-201ENST00000641636 310 ntBASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SSX2IPQ9Y2D8 AF127577.6-201ENST00000623352 2191 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 RNU5E-8P-201ENST00000363502 116 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-637P-201ENST00000384050 107 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 MIR218-2-201ENST00000385006 110 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 MTHFD2P2-201ENST00000407725 247 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 RNA5SP118-201ENST00000410385 109 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 RNU6-516P-201ENST00000411381 104 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 RPS7P15-201ENST00000415804 584 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 GTF2IP20-201ENST00000431663 360 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 MRPS18BP2-201ENST00000434310 759 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 DDX3P2-201ENST00000446138 111 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC010655.1-201ENST00000449336 292 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC104619.4-201ENST00000510773 249 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC046134.1-201ENST00000514454 666 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC103783.1-201ENST00000520506 373 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 OR4R3P-201ENST00000525084 838 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC006254.3-201ENST00000603353 884 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 AC103710.2-201ENST00000609912 942 ntBASIC4.04□□□□□ -1.76
SSX2IPQ9Y2D8 TUG1_1.1-201ENST00000610654 145 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms