Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.63□□□□□ -2.15
HHLA3Q9XRX5 AC243829.7-201ENST00000633081 225 ntBASIC1.63□□□□□ -2.15
HHLA3Q9XRX5 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.63□□□□□ -2.15
HHLA3Q9XRX5 MIR7515-201ENST00000637837 67 ntBASIC1.63□□□□□ -2.15
HHLA3Q9XRX5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 Y_RNA.25-201ENST00000362528 102 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 RNA5SP138-201ENST00000365098 114 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 SNORD65.1-201ENST00000390889 71 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 UBE2V1P2-201ENST00000397758 440 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 U3.40-201ENST00000408706 208 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 MTATP6P27-201ENST00000416987 621 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 CCDC58P2-201ENST00000417131 366 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC009963.1-201ENST00000417265 157 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 SEPT7P5-201ENST00000434048 306 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 UBE2FP3-201ENST00000436366 524 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC092427.1-201ENST00000439177 601 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AL049734.2-201ENST00000441066 616 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 HIGD1AP2-201ENST00000446367 280 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC244505.3-201ENST00000454598 187 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC022493.1-201ENST00000492984 337 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC022447.3-201ENST00000506865 495 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 SCARNA17.1-201ENST00000516211 143 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 SCARNA17.2-201ENST00000516334 143 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 RNU6-528P-201ENST00000516926 100 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 HSPA8P13-201ENST00000523715 472 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AP002770.2-201ENST00000543613 532 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 MIR5007-201ENST00000583098 95 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC002984.1-201ENST00000591692 448 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC005498.1-201ENST00000592125 465 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 DNAJC19P3-201ENST00000594491 331 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AL355877.2-201ENST00000603670 358 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 SCARNA17.4-201ENST00000614296 143 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 HMGB1P24-202ENST00000615653 685 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC009159.1-201ENST00000618386 642 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 MIR6130-201ENST00000619419 109 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC087821.2-201ENST00000637086 450 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 MIR1322-201ENST00000638013 71 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AC005832.2-201ENST00000538921 1430 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 AL137003.2-201ENST00000606924 2538 ntBASIC1.62□□□□□ -2.15
HHLA3Q9XRX5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 ANKRD36P1-201ENST00000344424 659 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 Y_RNA.111-201ENST00000363248 100 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 RNU6-216P-201ENST00000363282 104 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 U3.12-201ENST00000364498 214 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 RNU1-91P-201ENST00000364746 163 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 RNU6-217P-201ENST00000384164 104 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 HMGB1P17-201ENST00000403495 628 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AL591416.1-201ENST00000404015 867 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 COX6CP12-201ENST00000446748 202 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AP1S2P1-201ENST00000457344 379 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 RNU7-26P-201ENST00000458980 63 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 MTCO2P9-201ENST00000503214 694 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC138853.1-201ENST00000503549 823 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 SNRPGP1-201ENST00000553864 222 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC087465.1-201ENST00000560574 245 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AL138976.2-201ENST00000563989 694 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 MIR5002-201ENST00000584713 97 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 APOOP1-201ENST00000604695 592 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC080013.4-201ENST00000607624 649 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AL118556.2-201ENST00000614375 824 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AL590099.1-201ENST00000615276 138 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 MIR6766-201ENST00000622641 72 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC093875.1-201ENST00000623688 504 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 AC120349.2-201ENST00000625002 298 ntBASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HHLA3Q9XRX5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.6□□□□□ -2.15
HHLA3Q9XRX5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.6□□□□□ -2.15
HHLA3Q9XRX5 RNU5E-8P-201ENST00000363502 116 ntBASIC1.6□□□□□ -2.15
HHLA3Q9XRX5 RN7SKP226-201ENST00000364912 300 ntBASIC1.6□□□□□ -2.15
HHLA3Q9XRX5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HHLA3Q9XRX5 SNORA67.4-201ENST00000384688 142 ntBASIC1.6□□□□□ -2.15
HHLA3Q9XRX5 RPL17P50-201ENST00000396131 546 ntBASIC1.6□□□□□ -2.15
HHLA3Q9XRX5 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms