Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC090617.3-201ENST00000573670 475 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AC060771.1-201ENST00000582031 164 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 SNORD39.3-201ENST00000584451 71 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 BDP1P-201ENST00000582658 1990 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 NXPH1-205ENST00000602349 1953 ntBASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
PDZRN3Q9UPQ7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 AC099654.2-201ENST00000433031 1980 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 Y_RNA.272-201ENST00000364696 102 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 SNORA77-201ENST00000408716 125 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 RNU5E-9P-201ENST00000411164 104 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 OR2AH1P-201ENST00000425717 928 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 FTH1P1-201ENST00000437933 532 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 IGHV5-78-201ENST00000450948 295 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 AURKAPS2-201ENST00000454983 333 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 AC087190.1-201ENST00000484462 480 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 AC107032.1-201ENST00000485945 480 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 AC092436.3-201ENST00000511788 257 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 ELOCP5-201ENST00000604924 333 ntBASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PDZRN3Q9UPQ7 LINC02555-201ENST00000563933 1951 ntBASIC6.27□□□□□ -1.4
PDZRN3Q9UPQ7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 RLIMP1-201ENST00000339626 1680 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 Y_RNA.215-201ENST00000364204 112 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 RPL36AP6-201ENST00000435770 321 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 HMGB1P4-201ENST00000455362 567 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 AL133244.1-201ENST00000456007 258 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 HMGB1P25-201ENST00000468402 607 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 RNA5SP272-201ENST00000516095 111 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 RN7SKP276-201ENST00000516242 268 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 Y_RNA.687-201ENST00000516558 91 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 TUG1_4.1-201ENST00000619464 181 ntBASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDZRN3Q9UPQ7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 Y_RNA.71-201ENST00000362892 104 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 RNU6-596P-201ENST00000365395 98 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 SNORD116-14-201ENST00000383894 92 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 SNORD116-17-201ENST00000383929 92 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 SNORD116-15-201ENST00000384445 92 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 SNORD116-20-201ENST00000384529 92 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 SNORD116-19-201ENST00000384729 92 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 RNY4P18-201ENST00000391107 89 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AF186996.5-201ENST00000418098 904 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 RPL23AP4-201ENST00000427757 463 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AC022431.1-201ENST00000450941 438 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 NUTF2P7-201ENST00000453086 375 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AP001324.2-201ENST00000461163 319 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 CYCSP26-201ENST00000534107 320 ntBASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.26□□□□□ -1.41
PDZRN3Q9UPQ7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms