Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 TIMM9P3-201ENST00000428659 274 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC073464.1-201ENST00000429823 534 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 MTND5P20-201ENST00000448677 143 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 MTND2P24-201ENST00000453434 806 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RPS3AP14-201ENST00000483907 780 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RPL31P13-201ENST00000484151 370 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC069439.1-201ENST00000494739 167 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 KCTD9P5-201ENST00000504141 1170 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC098799.2-201ENST00000509466 868 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC009646.1-201ENST00000510455 318 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 OR5AQ1P-201ENST00000527596 927 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AP003122.4-201ENST00000530980 758 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC006270.2-201ENST00000578523 652 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 MIR4513-201ENST00000581077 86 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 DUXAP4-201ENST00000603046 613 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 XIAPP1-201ENST00000603162 600 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC121334.2-201ENST00000605387 271 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AL158211.4-201ENST00000606988 584 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC103710.3-201ENST00000608157 948 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC002553.4-201ENST00000616896 331 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC009159.1-201ENST00000618386 642 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 PISRT1-201ENST00000626175 531 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 AC010149.2-201ENST00000637608 315 ntBASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCAF8Q9UPN6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 SNORA31-201ENST00000362607 130 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 Y_RNA.70-201ENST00000362886 110 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 RNA5SP235-201ENST00000365411 114 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 RNU6-629P-201ENST00000384061 103 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 HLFP1-201ENST00000402375 499 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 RNU4-55P-201ENST00000410731 137 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 RNU6-195P-201ENST00000411352 109 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 SPA17P1-201ENST00000416656 452 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 USP9YP36-201ENST00000424581 829 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AL049734.2-201ENST00000441066 616 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 RPL9P32-201ENST00000464118 620 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC006445.1-201ENST00000491925 405 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 HMGB1P22-201ENST00000505315 124 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 HMGB1P29-201ENST00000505659 499 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 ARL4AP2-201ENST00000507378 601 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC114781.4-201ENST00000513707 639 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 Y_RNA.702-201ENST00000516843 96 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 RNU2-46P-201ENST00000517038 113 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AP001893.2-201ENST00000526949 202 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AP001646.1-201ENST00000527936 915 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AP000907.2-201ENST00000530827 353 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC109635.4-202ENST00000531666 412 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AK6P1-201ENST00000540219 478 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AL157394.1-201ENST00000562983 1224 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 MIR4719-201ENST00000585233 84 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 UBE2L4-201ENST00000587688 464 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 HMGN1P30-201ENST00000589286 268 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC004908.2-201ENST00000609090 574 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AL590282.1-201ENST00000610379 1136 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AL158801.5-201ENST00000623123 465 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AC138649.5-201ENST00000637456 137 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AL138713.1-201ENST00000624026 2130 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 AP001350.1-201ENST00000601906 1524 ntBASIC4.1□□□□□ -1.75
SCAF8Q9UPN6 FAM35DP-201ENST00000323387 2712 ntBASIC4.09□□□□□ -1.75
SCAF8Q9UPN6 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SCAF8Q9UPN6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.09□□□□□ -1.75
SCAF8Q9UPN6 AC018555.1-201ENST00000567548 1980 ntBASIC4.09□□□□□ -1.75
SCAF8Q9UPN6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SCAF8Q9UPN6 SNORA51.2-201ENST00000364595 132 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms