Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC027369.5-201ENST00000533838 755 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC004024.1-201ENST00000549244 247 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 NDUFB4P11-201ENST00000560510 395 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC234771.5-201ENST00000600161 514 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AL049539.1-201ENST00000611964 459 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 AC092376.2-201ENST00000622621 4116 ntBASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
FOXD3Q9UJU5 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RPL23P2-201ENST00000320371 421 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 SNORA17.1-201ENST00000362945 126 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RNA5SP443-201ENST00000363083 132 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RNU6-209P-201ENST00000384118 107 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 MIR550A3-201ENST00000390735 95 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 U3.36-201ENST00000408418 213 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AL358472.1-201ENST00000431295 329 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RPL12P3-201ENST00000440080 396 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RPEP5-201ENST00000441137 268 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC073850.1-201ENST00000449243 255 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AL356981.1-201ENST00000454879 684 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC092754.1-201ENST00000472975 479 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AP000797.2-201ENST00000475768 606 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RPS18P6-201ENST00000476880 458 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 TRBVB-201ENST00000477100 408 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC008953.1-201ENST00000497334 318 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AK3P2-201ENST00000507976 429 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 MTND1P19-201ENST00000511780 315 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 FTH1P9-201ENST00000513251 355 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RNU6-612P-201ENST00000516909 102 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AL590705.4-201ENST00000532209 134 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC007375.1-201ENST00000554513 578 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AMZ2P1-203ENST00000565833 850 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 SRGNP1-201ENST00000603392 451 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AL139395.1-201ENST00000603662 160 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC108738.1-201ENST00000603703 237 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC006077.1-201ENST00000604746 343 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC244107.2-201ENST00000611773 76 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AL355810.1-201ENST00000614629 552 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AC131238.1-201ENST00000617135 328 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 SDR42E1P4-201ENST00000620894 481 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 PCAT14-202ENST00000627127 3935 ntBASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
FOXD3Q9UJU5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
FOXD3Q9UJU5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 Y_RNA.27-201ENST00000362540 103 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 SNORD50.1-201ENST00000362987 71 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 LINC01399-202ENST00000458450 244 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AP004607.2-201ENST00000533949 322 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC103996.1-201ENST00000555468 102 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC006116.3-201ENST00000592968 361 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AL355877.2-201ENST00000603670 358 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC090132.2-201ENST00000615881 347 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC109583.2-201ENST00000617367 129 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 MTND5P6-201ENST00000422338 1798 ntBASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
FOXD3Q9UJU5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms