Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC092447.7-201ENST00000422212 1621 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 RNU6-925P-201ENST00000384629 104 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 MIR491-201ENST00000384877 84 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 SNORA48.5-201ENST00000391143 135 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL356057.2-201ENST00000403318 432 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL590004.2-201ENST00000404787 371 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL359704.1-201ENST00000411586 781 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL354692.1-201ENST00000423044 315 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 RPL7P37-201ENST00000425095 738 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 RPS15AP7-201ENST00000439294 405 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC098831.1-201ENST00000440661 216 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 NANOGNBP1-201ENST00000448444 480 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 RPL26P9-201ENST00000457466 433 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 RPL23AP41-201ENST00000484754 458 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 UBE2V1P12-201ENST00000503954 474 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 LTV1P1-201ENST00000510683 1237 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AP000857.1-201ENST00000532151 543 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC022080.3-201ENST00000544433 482 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL359212.1-201ENST00000556608 614 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 UBE2L4-201ENST00000587688 464 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 BNIP3P22-201ENST00000593399 556 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL355877.2-201ENST00000603670 358 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC140725.3-201ENST00000616193 880 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC091953.5-201ENST00000622919 233 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AL158801.5-201ENST00000623123 465 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC097655.1-201ENST00000635075 318 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 AC009487.2-201ENST00000420969 6821 ntBASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CHRNA9Q9UGM1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 RPL9P7-201ENST00000330965 580 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 MIR181A2-201ENST00000384863 110 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 MIR512-1-201ENST00000384913 84 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 RPS20P5-201ENST00000434808 360 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 MTCO2P20-201ENST00000437339 673 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 RSU1P2-202ENST00000437884 485 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 ELOCP30-201ENST00000447108 299 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 PTENP1-201ENST00000447117 1215 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 TPT1P14-201ENST00000448018 505 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 RPL37P4-201ENST00000448908 268 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 RPL36AP51-201ENST00000487216 318 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 MTND3P3-201ENST00000505004 126 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AL133153.1-201ENST00000557756 303 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC138761.3-201ENST00000579993 334 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC080013.3-201ENST00000606839 578 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC093732.2-201ENST00000607950 274 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC069234.5-201ENST00000611056 416 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AC107871.2-201ENST00000612894 502 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AL136981.2-201ENST00000617319 734 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 SNHG22-203ENST00000617833 660 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 AL355493.4-201ENST00000618530 292 ntBASIC2.6□□□□□ -1.99
CHRNA9Q9UGM1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 SNORA4.1-201ENST00000364263 144 ntBASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 RNU1-39P-201ENST00000383897 165 ntBASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 RNU6-906P-201ENST00000384700 70 ntBASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 RNU6-750P-201ENST00000390946 107 ntBASIC2.59□□□□□ -1.99
CHRNA9Q9UGM1 MTND4P13-201ENST00000402078 1023 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms