Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.02□□□□□ -2.25
CHD7Q9P2D1 AC010735.1-201ENST00000567305 1026 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 MIR4716-201ENST00000579628 84 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 AC008962.1-201ENST00000605729 304 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.02□□□□□ -2.25
CHD7Q9P2D1 MIR6857-201ENST00000613267 93 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
CHD7Q9P2D1 AC025263.3-201ENST00000622965 1396 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 ICE2P2-201ENST00000483823 2787 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 Y_RNA.303-201ENST00000364998 94 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 RPL5P19-201ENST00000404228 893 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 AC092447.6-201ENST00000414578 210 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.02□□□□□ -2.25
CHD7Q9P2D1 MRPL42P6-201ENST00000486397 371 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.02□□□□□ -2.25
CHD7Q9P2D1 AC093752.1-206ENST00000511823 336 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 YWHAQP7-201ENST00000603536 658 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 AL031775.1-201ENST00000607014 887 ntBASIC1.02□□□□□ -2.25
CHD7Q9P2D1 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 MIR330-201ENST00000362196 94 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 RNA5SP189-201ENST00000364920 115 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 COX6CP18-201ENST00000448769 222 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 HMGB3P30-201ENST00000457863 606 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 BZW1P2-201ENST00000473537 826 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 RPS15AP11-201ENST00000594193 385 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 MIR513A1-201ENST00000385138 129 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 AC234064.1-201ENST00000436312 247 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 DPRXP5-201ENST00000604662 539 ntBASIC1.01□□□□□ -2.25
CHD7Q9P2D1 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
CHD7Q9P2D1 SNORA67.1-201ENST00000364749 141 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHD7Q9P2D1 USP9YP33-201ENST00000412220 421 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1□□□□□ -2.25
CHD7Q9P2D1 USP9YP35-201ENST00000435696 412 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1□□□□□ -2.25
CHD7Q9P2D1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1□□□□□ -2.25
CHD7Q9P2D1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1□□□□□ -2.25
CHD7Q9P2D1 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC1□□□□□ -2.25
CHD7Q9P2D1 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHD7Q9P2D1 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHD7Q9P2D1 AC090897.2-201ENST00000581715 130 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 FAM71BP1-201ENST00000604431 523 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1□□□□□ -2.25
CHD7Q9P2D1 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1□□□□□ -2.25
CHD7Q9P2D1 XKRY2-202ENST00000623874 1581 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 XKRY-202ENST00000624960 1581 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 AL157700.1-201ENST00000561973 1432 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1□□□□□ -2.25
CHD7Q9P2D1 RNU6-115P-201ENST00000364310 107 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1□□□□□ -2.25
CHD7Q9P2D1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1□□□□□ -2.25
CHD7Q9P2D1 RBM43P1-201ENST00000476891 1081 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 AC107032.1-201ENST00000485945 480 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1□□□□□ -2.25
CHD7Q9P2D1 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1□□□□□ -2.25
CHD7Q9P2D1 MTND4P34-201ENST00000572715 1371 ntBASIC1□□□□□ -2.25
CHD7Q9P2D1 MIR144-201ENST00000384886 86 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 HMGB3P21-201ENST00000452483 547 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AL109933.3-201ENST00000619095 188 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 MIR924-201ENST00000638017 53 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 SNORA31.23-201ENST00000517219 133 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AC012443.1-201ENST00000605605 231 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AL161722.3-201ENST00000605789 2983 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 MIR1285-1-201ENST00000408593 84 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 MIR1197-201ENST00000408818 88 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 RPL31P63-201ENST00000422565 375 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AC009229.3-201ENST00000608056 282 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 AC112503.2-201ENST00000609005 552 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.99□□□□□ -2.25
CHD7Q9P2D1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CHD7Q9P2D1 MIR17-201ENST00000385012 84 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 AC018630.2-202ENST00000422992 927 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 SNORD108-201ENST00000459332 71 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 SNORD59.2-201ENST00000516873 68 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 MTCO3P24-201ENST00000572729 782 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 AC090425.2-201ENST00000608818 501 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 AC068620.4-201ENST00000636730 1182 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 AL356057.2-201ENST00000403318 432 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.98□□□□□ -2.25
CHD7Q9P2D1 AC010625.1-201ENST00000511296 403 ntBASIC0.98□□□□□ -2.25
CHD7Q9P2D1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms