Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ARL4AP2-201ENST00000507378 601 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AF131216.2-201ENST00000512316 564 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 RNA5SP290-201ENST00000517133 127 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC123904.2-201ENST00000548059 300 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC090888.1-201ENST00000561335 1141 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 UBL5P2-201ENST00000583788 219 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC006504.3-201ENST00000586818 523 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC024220.1-201ENST00000603675 484 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL670379.6-201ENST00000603753 252 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL670379.11-201ENST00000604059 253 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC008162.1-201ENST00000604718 254 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL670379.1-201ENST00000604752 252 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL670379.5-201ENST00000605253 252 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL670379.12-201ENST00000605291 253 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL670379.8-201ENST00000605353 252 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 YPEL5P2-201ENST00000605553 359 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AL670379.7-201ENST00000605823 252 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC099778.2-201ENST00000610904 211 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC084757.4-201ENST00000616350 526 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC026422.1-201ENST00000623961 452 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC068880.5-201ENST00000624331 290 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 AC092104.1-201ENST00000497346 1441 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 ZNF826P-207ENST00000622273 1910 ntBASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
BLOC1S4Q9NUP1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 Y_RNA.245-201ENST00000364493 95 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 RNY3P13-201ENST00000365542 102 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 EI24P2-201ENST00000397776 1076 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AL714022.1-201ENST00000439897 151 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC125238.1-201ENST00000448842 249 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 MTND1P12-201ENST00000455231 147 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 RPS29P12-201ENST00000460178 152 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC116337.2-201ENST00000477662 156 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 RN7SL504P-201ENST00000494496 287 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 RPS3AP4-201ENST00000555161 764 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 ZNF519P3-201ENST00000557158 1032 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 WISP1-OT1-201ENST00000602893 642 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC136601.2-201ENST00000604356 474 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC107294.1-201ENST00000609524 467 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 FTX_3.1-201ENST00000610451 147 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 BX664608.1-201ENST00000610519 487 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AL591516.1-201ENST00000611326 274 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC034102.8-201ENST00000615146 484 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 AC004777.1-201ENST00000624317 287 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 MTND5P29-201ENST00000458676 1807 ntBASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
BLOC1S4Q9NUP1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AL359693.1-201ENST00000614959 2407 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 OR1S2-201ENST00000302592 978 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 MIR888-201ENST00000401186 77 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 MRPL42P2-201ENST00000403169 426 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 MTCYBP36-201ENST00000404146 440 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 FCF1P10-201ENST00000407590 479 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 RPL7P49-201ENST00000471402 708 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 RNU2-10P-201ENST00000516375 211 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 RNU6-759P-201ENST00000516740 103 ntBASIC3.48□□□□□ -1.85
BLOC1S4Q9NUP1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms