Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 MIR5583-1-201ENST00000580941 59 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC013553.2-201ENST00000604244 589 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC009570.1-201ENST00000609599 745 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 AC009248.2-201ENST00000619826 254 ntBASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCM2LQ9NUG4 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 ZNF137P-201ENST00000456718 1920 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC073544.1-201ENST00000600110 1595 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC021146.4-201ENST00000309229 279 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 RNU6-50P-201ENST00000362356 103 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 RNU6-522P-201ENST00000364497 107 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 SNORA32.2-201ENST00000384049 122 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.615-201ENST00000410769 117 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 RAC1P3-201ENST00000416129 580 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 CYP4F29P-201ENST00000420685 446 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AL645937.1-202ENST00000421799 937 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 RPS6P12-201ENST00000432491 726 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 SCARNA18-201ENST00000459004 134 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 SNORA84-201ENST00000459229 133 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC116533.1-201ENST00000459748 321 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 CCDC34P1-201ENST00000507441 517 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 MTND3P22-201ENST00000510932 243 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 RANP9-201ENST00000519957 271 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AL360157.1-201ENST00000565962 87 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC034105.4-201ENST00000568304 277 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 RPL23AP87-202ENST00000573039 466 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC093227.2-201ENST00000589357 285 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 ARF4P1-201ENST00000605447 541 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 AC092807.2-201ENST00000609367 243 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 ZYXP1-201ENST00000617638 118 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCM2LQ9NUG4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC008568.2-201ENST00000623862 2313 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 U3.12-201ENST00000364498 214 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 Y_RNA.530-201ENST00000384587 101 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 RNA5SP397-201ENST00000391323 118 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 RPL32P23-201ENST00000397237 405 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 RN7SKP32-201ENST00000410167 303 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 BX323014.1-201ENST00000412876 237 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AL160275.3-201ENST00000423876 471 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AL365400.1-201ENST00000431854 640 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC008264.1-201ENST00000447612 367 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 RPS15AP27-201ENST00000449183 343 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 VN1R17P-201ENST00000472048 1090 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 RNA5SP468-201ENST00000516782 93 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC107016.1-201ENST00000550463 337 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 PSMA3P-201ENST00000555485 635 ntBASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.1□□□□□ -1.75
CCM2LQ9NUG4 uc_338.5-201ENST00000611839 155 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms