Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 U8.14-201ENST00000390843 143 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 RPL37P21-201ENST00000435890 276 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 MTCO3P45-201ENST00000443036 613 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AL049874.1-201ENST00000489560 388 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 RNU6-840P-201ENST00000517275 65 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 CASP1P1-201ENST00000526345 212 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AP000857.1-201ENST00000532151 543 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 HMGB1P14-201ENST00000557424 591 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 MIR4325-201ENST00000583049 90 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AC068790.3-201ENST00000602988 553 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AC122133.1-201ENST00000613964 233 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AL162274.2-201ENST00000614406 332 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 AL356266.1-201ENST00000623311 483 ntBASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.77□□□□□ -1.81
SMC4Q9NTJ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 RNU6-501P-201ENST00000364072 100 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 TXNP7-201ENST00000406296 293 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC009518.2-201ENST00000418056 731 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 Z99497.1-201ENST00000421282 135 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 CYCSP32-201ENST00000440548 321 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 RPS20P20-201ENST00000460498 340 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC111000.2-201ENST00000507775 550 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 SNORD59.2-201ENST00000516873 68 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC091489.2-201ENST00000566263 604 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 MIR3915-201ENST00000578518 97 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 TPMTP1-201ENST00000592307 737 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AF131215.7-201ENST00000602443 707 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 MTCYBP22-201ENST00000603788 447 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC013553.2-201ENST00000604244 589 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC007038.2-201ENST00000608095 740 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AL603755.1-201ENST00000619504 163 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC078883.4-201ENST00000623218 367 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 AC007494.3-201ENST00000624660 743 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SMC4Q9NTJ3 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC022336.2-201ENST00000568966 2538 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 RNU6-920P-201ENST00000410926 92 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 UBE2FP1-201ENST00000416536 447 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 RPL7P46-201ENST00000425129 740 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AL049734.2-201ENST00000441066 616 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 UBE2D3P4-201ENST00000441973 436 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 MTND2P24-201ENST00000453434 806 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 ZNF114P1-201ENST00000453500 292 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 RNU6-711P-201ENST00000517255 106 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC100870.1-201ENST00000522035 505 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 H3F3AP1-201ENST00000559984 334 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 ROCK1P1-201ENST00000573767 549 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC008088.1-201ENST00000580993 280 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AF246928.1-201ENST00000623768 87 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC112204.3-201ENST00000623822 332 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 AC068057.2-201ENST00000624047 895 ntBASIC3.75□□□□□ -1.81
SMC4Q9NTJ3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SMC4Q9NTJ3 AC000403.1-201ENST00000613696 3585 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms