Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC011451.2-201ENST00000604303 598 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC069545.1-201ENST00000605671 358 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AL390208.1-201ENST00000605885 644 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 MIR6895-201ENST00000613497 78 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC090132.2-201ENST00000615881 347 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC253576.2-201ENST00000618815 580 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AL596245.1-201ENST00000618994 362 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AP003476.1-201ENST00000623984 516 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AP003485.1-201ENST00000625093 753 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC126544.2-201ENST00000625174 749 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.28□□□□□ -2.04
TREX1Q9NSU2 AL137003.2-201ENST00000606924 2538 ntBASIC2.28□□□□□ -2.04
TREX1Q9NSU2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.28□□□□□ -2.05
TREX1Q9NSU2 AC009902.3-201ENST00000606235 2172 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 RNU6-270P-201ENST00000364131 105 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 MTCO3P30-201ENST00000426425 670 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AL512844.2-201ENST00000433990 593 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 TAAR7P-201ENST00000436141 242 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 UBE2V1P13-201ENST00000436983 439 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 FGF7P5-201ENST00000441829 291 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 WASF1P1-201ENST00000447560 1131 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC092155.2-201ENST00000454675 477 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 SUMO2P5-201ENST00000506790 245 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 MTCYBP16-201ENST00000509187 1129 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 NDUFB4P2-201ENST00000509515 391 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 TTC39CP1-201ENST00000512513 755 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC114781.4-201ENST00000513707 639 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC112198.4-201ENST00000515450 351 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 SLC2A13P1-201ENST00000531560 322 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC007115.1-201ENST00000546853 234 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 MIR4672-201ENST00000583126 81 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AL022067.1-201ENST00000602426 454 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC013553.2-201ENST00000604244 589 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC009237.15-201ENST00000610252 501 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AL449363.1-201ENST00000617815 186 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 CU459211.1-201ENST00000635667 749 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 AP003399.1-201ENST00000637534 361 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
TREX1Q9NSU2 OR4G2P-202ENST00000641004 1759 ntBASIC2.27□□□□□ -2.05
TREX1Q9NSU2 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RPL21P132-201ENST00000331267 462 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RNA5SP289-201ENST00000362332 137 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 snoZ40.1-201ENST00000364540 72 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 U3.20-201ENST00000390909 217 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AF274854.1-201ENST00000413236 615 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 SPA17P1-201ENST00000416656 452 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 ATP5F1P1-201ENST00000433775 569 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AL714022.1-201ENST00000439897 151 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 MTCYBP3-201ENST00000445588 1137 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 DDX3P2-201ENST00000446138 111 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 DPPA3P1-201ENST00000448050 469 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 TRGVB-201ENST00000453257 471 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 snoU13.8-201ENST00000458890 104 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC116337.2-201ENST00000477662 156 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC079203.1-201ENST00000487972 404 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RNU6-583P-201ENST00000516012 92 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RN7SKP31-201ENST00000516354 278 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RNU6-1256P-201ENST00000516539 103 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RNU6-528P-201ENST00000516926 100 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 SNORA31.22-201ENST00000517204 135 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AP001646.1-201ENST00000527936 915 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 LRRC6P1-201ENST00000532188 885 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 HIGD1AP17-201ENST00000554576 276 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC068135.2-201ENST00000569293 1028 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 MIR4298-201ENST00000584380 73 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AL158211.4-201ENST00000606988 584 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 HMGB1P24-202ENST00000615653 685 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC025034.2-201ENST00000623264 286 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
TREX1Q9NSU2 AC005539.1-201ENST00000443768 1479 ntBASIC2.26□□□□□ -2.05
TREX1Q9NSU2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 MIR514A1-201ENST00000385133 98 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.25□□□□□ -2.05
TREX1Q9NSU2 MTND4P6-201ENST00000438297 472 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 MTND2P20-201ENST00000440805 661 ntBASIC2.25□□□□□ -2.05
TREX1Q9NSU2 COX6CP12-201ENST00000446748 202 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms