Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 RNU5F-3P-201ENST00000363767 117 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 Y_RNA.307-201ENST00000365022 117 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 RNU1-140P-201ENST00000365040 165 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 SNORD78.2-201ENST00000391076 69 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC026310.1-201ENST00000396004 378 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AL353133.1-201ENST00000407695 401 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC096920.1-201ENST00000423991 241 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 BX679664.1-201ENST00000434429 253 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 SNORA71B-202ENST00000439232 272 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC000111.2-201ENST00000448200 210 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 snoU13.28-201ENST00000459235 104 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 RNU7-23P-201ENST00000459465 62 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 RN7SL372P-201ENST00000461982 298 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 TOMM22P6-201ENST00000465035 409 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC087477.1-201ENST00000465747 340 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC105384.2-201ENST00000508433 640 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 RN7SKP122-201ENST00000515923 296 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 SNORA31.23-201ENST00000517219 133 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC115990.1-201ENST00000526957 301 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 HSPE1P4-201ENST00000550617 308 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC021231.3-201ENST00000558497 370 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC010287.1-201ENST00000566916 357 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC005899.6-201ENST00000620729 297 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RTN4Q9NQC3 AC018529.3-201ENST00000624212 2254 ntBASIC6.87□□□□□ -1.31
RTN4Q9NQC3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 BBX-203ENST00000402543 3980 ntTSL 5 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 RNA5SP308-201ENST00000362532 115 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 RNU1-5P-201ENST00000362684 144 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 RN7SKP257-201ENST00000364525 309 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 Y_RNA.350-201ENST00000365409 98 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AL589794.1-201ENST00000424971 390 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 GSTM5P1-201ENST00000434751 660 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AL161651.1-201ENST00000440882 223 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 GPM6BP3-201ENST00000442797 145 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 NUTF2P3-201ENST00000448540 384 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 ISCUP1-201ENST00000454451 448 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AC107626.1-201ENST00000471084 183 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 RPS18P6-201ENST00000476880 458 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 COX6B1P2-201ENST00000489624 230 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AC010343.2-201ENST00000510162 224 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 RNU6-581P-201ENST00000516214 105 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AP003733.2-201ENST00000529409 171 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 HMGN1P26-201ENST00000558737 303 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 MIR7159-201ENST00000620587 66 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
RTN4Q9NQC3 AC002543.1-201ENST00000299783 1954 ntBASIC6.86□□□□□ -1.31
RTN4Q9NQC3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AL136164.4-201ENST00000625013 2135 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RNU1-84P-201ENST00000365447 164 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RNU6-541P-201ENST00000384709 110 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 BX510359.2-201ENST00000417920 305 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AC005300.1-201ENST00000428401 373 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 Z82188.1-201ENST00000436709 154 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RNU6-1132P-201ENST00000459214 107 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AC025465.3-201ENST00000510570 311 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RNA5SP360-201ENST00000516555 118 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 RNU6-567P-201ENST00000516746 107 ntBASIC6.85□□□□□ -1.31
RTN4Q9NQC3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms