Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC012181.1-201ENST00000479895 423 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 AC090096.1-201ENST00000489168 390 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 AC008427.1-201ENST00000503102 655 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 MIR4458-201ENST00000578872 75 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 DUXAP3-201ENST00000603616 594 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CHD8Q9HCK8 OR5H6-203ENST00000642105 978 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 CENPCP1-201ENST00000533085 2578 ntBASIC1.1□□□□□ -2.23
CHD8Q9HCK8 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.09□□□□□ -2.23
CHD8Q9HCK8 RNU1-148P-201ENST00000384472 162 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 MIR329-1-201ENST00000385028 80 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 TRAV31-201ENST00000502780 342 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 AC093801.2-201ENST00000503966 1050 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 AC104115.2-201ENST00000523026 687 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.09□□□□□ -2.23
CHD8Q9HCK8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.09□□□□□ -2.23
CHD8Q9HCK8 AC121758.2-201ENST00000553271 193 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.09□□□□□ -2.23
CHD8Q9HCK8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 MIR4278-201ENST00000636094 69 ntBASIC1.09□□□□□ -2.23
CHD8Q9HCK8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.23
CHD8Q9HCK8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CHD8Q9HCK8 RNU6-1235P-201ENST00000384559 107 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 RNA5SP465-201ENST00000391195 109 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 MIR936-201ENST00000401264 98 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 PRELID3BP11-201ENST00000414230 479 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.09□□□□□ -2.24
CHD8Q9HCK8 RSL24D1P2-201ENST00000445584 366 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 RNU6-498P-201ENST00000459468 107 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.09□□□□□ -2.24
CHD8Q9HCK8 SEM1P1-201ENST00000506694 209 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 MTCO1P30-201ENST00000515244 580 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 RN7SKP34-201ENST00000516142 244 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 SNORA31.26-201ENST00000517250 137 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 AC090821.2-201ENST00000523552 176 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 OR6C7P-201ENST00000547875 934 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 AC068714.1-201ENST00000559623 800 ntBASIC1.09□□□□□ -2.24
CHD8Q9HCK8 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AL049838.1-201ENST00000563647 981 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC123786.2-201ENST00000603459 275 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC138473.1-201ENST00000605717 526 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC008083.4-201ENST00000615076 444 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 RNA5SP489-201ENST00000410986 109 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC092832.1-201ENST00000422934 400 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC092451.1-201ENST00000480211 153 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC067942.3-201ENST00000512025 362 ntBASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
CHD8Q9HCK8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 MTND4LP13-201ENST00000425022 298 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 HMGB1P9-201ENST00000429856 646 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 RPL7P34-201ENST00000433316 712 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 SNORD108-201ENST00000459332 71 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 MIR4711-201ENST00000578274 70 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC009229.3-201ENST00000608056 282 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC006338.1-201ENST00000618453 749 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC114546.3-201ENST00000623582 1734 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 MIR124-3-201ENST00000384866 87 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AL356776.1-201ENST00000406574 447 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC084757.1-201ENST00000559987 490 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 AC090953.1-201ENST00000604305 1092 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 Pinc.1-201ENST00000616452 154 ntBASIC1.07□□□□□ -2.24
CHD8Q9HCK8 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.07□□□□□ -2.24
CHD8Q9HCK8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 VTRNA1-1-201ENST00000363120 99 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AL357078.2-201ENST00000416486 427 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 SNRPGP12-201ENST00000449481 213 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 MTCO2P9-201ENST00000503214 694 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AC048347.1-201ENST00000624621 427 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AP002907.1-201ENST00000606361 1430 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 SNX3P1X-201ENST00000414887 175 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AC106901.1-201ENST00000425086 698 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 HMGB3P30-201ENST00000457863 606 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AC089999.1-201ENST00000460336 374 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AC087190.1-201ENST00000484462 480 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AC093281.2-201ENST00000510153 597 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 AP003117.1-201ENST00000602771 554 ntBASIC1.06□□□□□ -2.24
CHD8Q9HCK8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CHD8Q9HCK8 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.05□□□□□ -2.24
CHD8Q9HCK8 AC244636.1-201ENST00000421152 228 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms