Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 HSPE1P28-201ENST00000443139 211 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC007967.1-201ENST00000455422 1159 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 BX510359.1-201ENST00000456973 237 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 PABPC1P3-201ENST00000469174 459 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 RNU6-277P-201ENST00000516272 106 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC034105.3-201ENST00000565294 442 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC015917.1-201ENST00000579654 510 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC018638.8-201ENST00000588755 281 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC011712.1-201ENST00000588959 234 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 AC006116.10-201ENST00000591836 581 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 BBIP1P1-201ENST00000602999 279 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 RMST_8.1-201ENST00000610287 165 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.75□□□□□ -1.81
EBF3Q9H4W6 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
EBF3Q9H4W6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AP001486.2-201ENST00000561652 5113 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 NMD3P1-201ENST00000439704 1488 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 RNU1-39P-201ENST00000383897 165 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 RPL7P25-201ENST00000404151 721 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 RPL31P2-201ENST00000413849 377 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 BTF3L4P3-201ENST00000418879 476 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL158156.1-201ENST00000422509 473 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL035410.1-201ENST00000427409 427 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 NIPA2P5-201ENST00000452282 464 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AC233279.1-201ENST00000455300 423 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL136126.1-201ENST00000473603 402 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 RPS3AP50-201ENST00000487064 803 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 TRBV12-2-201ENST00000489763 344 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AC093278.1-201ENST00000494700 600 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AC110792.2-201ENST00000510278 224 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 SUB1P2-201ENST00000556401 297 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AC012182.1-201ENST00000570133 895 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL360085.1-201ENST00000604713 532 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL160281.1-201ENST00000605307 311 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AL133255.1-201ENST00000606374 441 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 MIR98-201ENST00000606724 119 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 AC009318.4-201ENST00000620496 486 ntBASIC3.74□□□□□ -1.81
EBF3Q9H4W6 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
EBF3Q9H4W6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 Y_RNA.46-201ENST00000362695 102 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 RNU6-744P-201ENST00000365557 107 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 RNU6-1316P-201ENST00000384242 108 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 HLFP1-201ENST00000402375 499 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 DBIP2-201ENST00000419076 262 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AL353678.1-201ENST00000422735 741 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC091390.3-201ENST00000426478 338 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 HMGB3P12-201ENST00000438745 556 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 RPS15AP9-201ENST00000439856 381 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC010655.1-201ENST00000449336 292 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 SNRPGP5-201ENST00000456003 220 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 RPL21P10-201ENST00000463521 490 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC008155.2-201ENST00000464337 397 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC096576.1-201ENST00000489014 359 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC034222.1-201ENST00000494052 532 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC093767.1-201ENST00000504523 156 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC105029.1-201ENST00000520250 669 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 SUMO2P20-201ENST00000520803 283 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 OR5B19P-201ENST00000531766 928 ntBASIC3.73□□□□□ -1.81
EBF3Q9H4W6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.73□□□□□ -1.81
EBF3Q9H4W6 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms