Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 SNORA68.1-201ENST00000364537 132 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 SNORA16B-201ENST00000364674 135 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM4Q9C037 MIR767-201ENST00000390228 109 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 SUMO2P12-201ENST00000405924 140 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 PNRC2P1-201ENST00000423940 420 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC087588.1-201ENST00000462203 316 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 MRPS36P2-201ENST00000512569 299 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 RNU6-928P-201ENST00000516876 104 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 COX6CP5-201ENST00000527162 228 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 SNRPGP18-201ENST00000553000 214 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 HMGB1P14-201ENST00000557424 591 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC023824.2-201ENST00000566185 400 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 VN1R88P-201ENST00000596787 292 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC079395.3-201ENST00000615161 484 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AP001486.3-201ENST00000615334 372 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AC009032.1-201ENST00000617574 431 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 AL022578.1-201ENST00000439330 1433 ntBASIC2.05□□□□□ -2.08
TRIM4Q9C037 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
TRIM4Q9C037 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.05□□□□□ -2.08
TRIM4Q9C037 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM4Q9C037 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM4Q9C037 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TRIM4Q9C037 MIR583-201ENST00000384846 75 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC090774.1-201ENST00000435925 246 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AL714022.1-201ENST00000439897 151 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 MTCYBP3-201ENST00000445588 1137 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC116337.2-201ENST00000477662 156 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC005840.1-201ENST00000498412 377 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 MTCO2P9-201ENST00000503214 694 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC096571.1-202ENST00000506634 735 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 RNA5SP200-201ENST00000516360 103 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 RNU6-798P-201ENST00000516912 103 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 AK6P1-201ENST00000540219 478 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 MIR3122-201ENST00000577243 73 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 SNORD39.3-201ENST00000584451 71 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 AP005137.2-201ENST00000609238 400 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC010378.1-201ENST00000619270 362 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 YWHAEP7-203ENST00000622054 312 ntBASIC2.04□□□□□ -2.08
TRIM4Q9C037 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.04□□□□□ -2.08
TRIM4Q9C037 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM4Q9C037 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM4Q9C037 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 RNU6-1155P-201ENST00000363554 107 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 RPS15AP27-201ENST00000449183 343 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC017007.3-201ENST00000479865 435 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 RPL30P5-201ENST00000494923 336 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC147055.4-201ENST00000504399 745 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC093767.1-201ENST00000504523 156 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC006390.1-201ENST00000508068 283 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 Y_RNA.670-201ENST00000516255 105 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 SCARNA16.3-201ENST00000516595 184 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 SNORA31.18-201ENST00000517043 134 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 MIR3616-201ENST00000584070 92 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 RN7SL622P-201ENST00000585292 275 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AP001542.2-201ENST00000593141 364 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 AC004852.3-201ENST00000614131 326 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TRIM4Q9C037 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
TRIM4Q9C037 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TRIM4Q9C037 AP005901.5-201ENST00000545779 1796 ntBASIC2.03□□□□□ -2.09
TRIM4Q9C037 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TRIM4Q9C037 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.02□□□□□ -2.09
TRIM4Q9C037 RNU6-882P-201ENST00000391025 103 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
TRIM4Q9C037 USP9YP6-201ENST00000413550 854 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms