Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC025465.4-201ENST00000513422 638 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 RNU2-58P-201ENST00000516403 183 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 RNA5SP143-201ENST00000516936 115 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 OR5D17P-201ENST00000531492 978 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 MIR4703-201ENST00000577728 79 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC015917.1-201ENST00000579654 510 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 RN7SL600P-201ENST00000581811 299 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC002545.1-201ENST00000592511 181 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 BNIP3P30-201ENST00000601184 574 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC007619.2-201ENST00000605743 379 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC008945.2-201ENST00000606056 604 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC006023.2-201ENST00000609916 167 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 MIR6868-201ENST00000611215 58 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AL355073.2-201ENST00000612106 557 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AL365204.3-201ENST00000612448 685 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC079684.1-201ENST00000621405 437 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC011155.2-201ENST00000623202 216 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 AC024614.3-201ENST00000637860 256 ntBASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
TRIM54Q9BYV2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM54Q9BYV2 AC116096.1-201ENST00000566804 2314 ntBASIC3.9□□□□□ -1.78
TRIM54Q9BYV2 RIOK3P1-201ENST00000418778 1528 ntBASIC3.9□□□□□ -1.78
TRIM54Q9BYV2 MTND4P14-201ENST00000435799 1354 ntBASIC3.9□□□□□ -1.78
TRIM54Q9BYV2 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM54Q9BYV2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM54Q9BYV2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
TRIM54Q9BYV2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RNU6-50P-201ENST00000362356 103 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RNU6-552P-201ENST00000362869 119 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RNU6-867P-201ENST00000364956 107 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 SNORD115-7-201ENST00000365306 82 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 Y_RNA.576-201ENST00000384781 102 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RNU6-817P-201ENST00000391083 104 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RPL30P16-201ENST00000419341 429 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 HMGB1P37-201ENST00000439613 609 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 TXNP1-201ENST00000441872 371 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RPL37P6-201ENST00000460682 294 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 EIF4EP3-201ENST00000498782 656 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RN7SKP60-201ENST00000516985 239 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 NRON-201ENST00000517270 370 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 NARSP2-201ENST00000518524 679 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AF235103.2-201ENST00000525753 346 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 ADI1P3-201ENST00000549509 470 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 RMST_3.1-201ENST00000611651 109 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AC012409.4-201ENST00000612923 249 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AC112484.5-201ENST00000624189 228 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 MIR6830-201ENST00000636015 70 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 OR52H1-202ENST00000641796 1061 ntBASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
TRIM54Q9BYV2 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 NCAPGP1-201ENST00000505112 1814 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 RPL7P26-201ENST00000333817 754 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 SNORA70C-201ENST00000384538 135 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 MT-TL1-201ENST00000386347 75 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 AL022722.2-201ENST00000402519 180 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 SNRPFP3-201ENST00000457792 225 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 RPL21P11-201ENST00000461458 483 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 RPL21P104-201ENST00000464143 478 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 RPS23P7-201ENST00000466210 444 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 RPL38P4-201ENST00000502376 214 ntBASIC3.89□□□□□ -1.79
TRIM54Q9BYV2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms