Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 OSBPL9P3-201ENST00000534523 595 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 MIR4285-201ENST00000581001 85 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC009220.3-201ENST00000604318 586 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC008962.1-201ENST00000605729 304 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC020658.4-201ENST00000613987 684 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 MIR17-201ENST00000385012 84 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 KATNBL1P3-201ENST00000443475 909 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC096992.1-201ENST00000459808 709 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AC135279.1-201ENST00000543493 504 ntBASIC1.91□□□□□ -2.1
SCAPERQ9BY12 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.91□□□□□ -2.1
SCAPERQ9BY12 RNU6-532P-201ENST00000384318 107 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AL033519.2-201ENST00000403958 392 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.9□□□□□ -2.11
SCAPERQ9BY12 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AC010301.1-201ENST00000473936 355 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AC068338.1-201ENST00000565567 176 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 UBE2L4-201ENST00000587688 464 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AL590282.1-201ENST00000610379 1136 ntBASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.9□□□□□ -2.11
SCAPERQ9BY12 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.89□□□□□ -2.11
SCAPERQ9BY12 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SCAPERQ9BY12 RNU6-1181P-201ENST00000384191 106 ntBASIC1.89□□□□□ -2.11
SCAPERQ9BY12 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC1.89□□□□□ -2.11
SCAPERQ9BY12 MTND5P10-201ENST00000603719 1809 ntBASIC1.89□□□□□ -2.11
SCAPERQ9BY12 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SCAPERQ9BY12 RNU6-697P-201ENST00000363348 107 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 MIR676-201ENST00000390702 67 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 AL035407.2-201ENST00000454090 378 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 RPL12P25-201ENST00000455592 494 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 AC010285.1-201ENST00000470580 392 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SCAPERQ9BY12 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.88□□□□□ -2.11
SCAPERQ9BY12 AC020699.1-201ENST00000505161 445 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 ARL2BPP4-201ENST00000506854 471 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 OR5BM1P-201ENST00000512021 366 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 RN7SKP277-201ENST00000516895 283 ntBASIC1.88□□□□□ -2.11
SCAPERQ9BY12 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.88□□□□□ -2.11
SCAPERQ9BY12 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 RN7SKP51-201ENST00000410781 304 ntBASIC1.87□□□□□ -2.11
SCAPERQ9BY12 AC096533.1-201ENST00000411645 353 ntBASIC1.87□□□□□ -2.11
SCAPERQ9BY12 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 MTND3P6-201ENST00000485242 339 ntBASIC1.87□□□□□ -2.11
SCAPERQ9BY12 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.87□□□□□ -2.11
SCAPERQ9BY12 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 OR1L1-202ENST00000373686 1083 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AL512504.1-201ENST00000415494 778 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AL031663.1-201ENST00000437445 219 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 MTND4LP16-201ENST00000440828 295 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AL078601.1-201ENST00000444542 271 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 BMI1P1-201ENST00000445879 941 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 MIR449C-201ENST00000516047 92 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 CIR1P1-201ENST00000524055 1133 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AC073592.7-201ENST00000623659 507 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.86□□□□□ -2.11
SCAPERQ9BY12 AC121333.1-201ENST00000567488 2709 ntBASIC1.86□□□□□ -2.11
SCAPERQ9BY12 U8.3-201ENST00000363321 132 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.85□□□□□ -2.11
SCAPERQ9BY12 MTND2P29-201ENST00000438595 412 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.85□□□□□ -2.11
SCAPERQ9BY12 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.85□□□□□ -2.11
SCAPERQ9BY12 LTV1P1-201ENST00000510683 1237 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 RN7SKP265-201ENST00000516448 223 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 AC022690.1-201ENST00000526681 550 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 AC109446.2-201ENST00000567872 497 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 AC016727.2-201ENST00000603988 621 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 AC099654.7-201ENST00000635788 2127 ntBASIC1.85□□□□□ -2.11
SCAPERQ9BY12 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SCAPERQ9BY12 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms