Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 RNU6-750P-201ENST00000390946 107 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC016769.3-201ENST00000396562 315 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 UBE2V1P2-201ENST00000397758 440 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AL450338.1-201ENST00000407987 512 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 RNA5SP270-201ENST00000411361 118 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC023141.4-201ENST00000412031 328 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC003685.2-201ENST00000422795 395 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC005345.1-201ENST00000431868 217 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 IFNA20P-201ENST00000436840 528 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 CDC42P1-201ENST00000456658 548 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AP001486.1-201ENST00000463339 476 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 RPL7P18-201ENST00000478965 734 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 RPL23AP41-201ENST00000484754 458 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC138853.1-201ENST00000503549 823 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 HMGB1P1-201ENST00000522557 636 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC012414.2-201ENST00000559474 187 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC078899.2-201ENST00000595282 212 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 GAS5-AS1-201ENST00000602767 694 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AL031176.1-201ENST00000604554 466 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC104307.1-201ENST00000616142 196 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AL160394.1-201ENST00000624765 724 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC243829.7-201ENST00000633081 225 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 AC010149.2-201ENST00000637608 315 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 SGO1P1-201ENST00000603525 1447 ntBASIC1.2□□□□□ -2.22
LIMD2Q9BT23 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
LIMD2Q9BT23 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RNU4-42P-201ENST00000364738 142 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RNU6-1083P-201ENST00000384022 107 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RNU6-76P-201ENST00000384060 104 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RNU6-997P-201ENST00000384725 107 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 MIR325-201ENST00000385260 98 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 MIR16-1-201ENST00000385271 89 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 HMGB1P17-201ENST00000403495 628 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC019129.1-201ENST00000403786 261 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RNU2-47P-201ENST00000410649 186 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RNA5SP489-201ENST00000410986 109 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 HMGB1P11-201ENST00000413899 637 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC096649.2-201ENST00000416186 393 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 CYCSP48-201ENST00000417124 323 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 DPH3P2-201ENST00000422618 250 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AIMP1P2-201ENST00000425294 312 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC018634.1-201ENST00000437554 401 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 HSPE1P21-201ENST00000438283 308 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 OR10R1P-201ENST00000441524 1141 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RPL7P36-201ENST00000444633 681 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC096638.1-201ENST00000444678 216 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 RPL7P12-201ENST00000446719 750 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AP1S2P1-201ENST00000457344 379 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC068781.1-201ENST00000488231 618 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 SNORA31.22-201ENST00000517204 135 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 HSPE1P18-201ENST00000517602 280 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AP002748.2-201ENST00000528671 348 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC118273.2-201ENST00000532092 465 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 ZNF849P-201ENST00000594711 1566 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC068313.1-201ENST00000604028 1008 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC025588.2-201ENST00000604851 466 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 BNIP3P19-201ENST00000605397 577 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC010378.1-201ENST00000619270 362 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC244517.12-201ENST00000623581 663 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC008555.8-201ENST00000623602 2168 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC073592.7-201ENST00000623659 507 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 AC068057.2-201ENST00000624047 895 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 MIR219B-201ENST00000637023 88 ntBASIC1.19□□□□□ -2.22
LIMD2Q9BT23 ADAM3A-203ENST00000461344 2157 ntBASIC1.18□□□□□ -2.22
LIMD2Q9BT23 AC103710.2-202ENST00000641454 2853 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms