Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRIM56Q9BRZ2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.106-201ENST00000363189 100 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.396-201ENST00000383949 103 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 RNU6-842P-201ENST00000384269 107 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 Y_RNA.512-201ENST00000384518 102 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 SNORA66-201ENST00000384792 133 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AL109941.1-201ENST00000401925 229 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AF186996.5-201ENST00000418098 904 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 MRPS18CP6-201ENST00000423587 223 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 TDGF1P1-201ENST00000445734 527 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 KNOP1P3-201ENST00000446933 426 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 PRDX3P3-201ENST00000447765 522 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC000111.2-201ENST00000448200 210 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 SUMO1P2-201ENST00000452524 304 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC097484.1-201ENST00000471148 389 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 RNA5SP249-201ENST00000516127 99 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 MIR4646-201ENST00000580775 63 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC006116.3-201ENST00000592968 361 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC004805.2-201ENST00000605382 482 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC002044.1-201ENST00000606707 158 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC006065.5-201ENST00000623427 349 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 AC009812.4-201ENST00000569134 1805 ntBASIC4.97□□□□□ -1.61
TRIM56Q9BRZ2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM56Q9BRZ2 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRIM56Q9BRZ2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 SNORA36C-201ENST00000384289 132 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 U3.36-201ENST00000408418 213 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 PSMD10P3-201ENST00000437000 448 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 DYNLT3P2-201ENST00000442517 295 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC073850.1-201ENST00000449243 255 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 RNU7-187P-201ENST00000458985 68 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC092324.1-201ENST00000468671 324 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC011005.2-201ENST00000487324 359 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 CDH12P4-201ENST00000517835 295 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 CDH12P3-201ENST00000517935 295 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 CDH12P1-201ENST00000518435 295 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 MIR3691-201ENST00000578066 90 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 AC015967.1-201ENST00000619893 476 ntBASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
TRIM56Q9BRZ2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC138393.1-203ENST00000327086 343 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RN7SKP115-201ENST00000363177 317 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-1329P-201ENST00000365664 107 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 Y_RNA.577-201ENST00000384794 101 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 TBCAP2-201ENST00000416175 326 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 PGBD4P6-201ENST00000421501 610 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 CKS1BP6-201ENST00000424932 240 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AL590762.4-201ENST00000425885 253 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RPL7P2-201ENST00000427639 268 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RPS15AP10-201ENST00000432472 382 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC073910.1-201ENST00000445047 438 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 PCMTD1P1-201ENST00000455560 355 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RPL21P41-201ENST00000459863 264 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RPL17P19-201ENST00000489069 552 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 RNU6-927P-201ENST00000516199 100 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 SNORA40.14-201ENST00000516543 86 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 Y_RNA.715-201ENST00000517082 110 ntBASIC4.95□□□□□ -1.62
TRIM56Q9BRZ2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms