Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 SPA17P1-201ENST00000416656 452 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC019097.1-201ENST00000424783 735 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 GOT2P5-201ENST00000433995 546 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.09□□□□□ -1.91
CPNE1Q99829 MTND1P28-201ENST00000435623 950 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 Z83846.1-201ENST00000446798 265 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 GAPDHP27-201ENST00000447427 1020 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AC140076.1-201ENST00000449897 361 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.09□□□□□ -1.91
CPNE1Q99829 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC006445.2-201ENST00000510061 472 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC114797.1-201ENST00000514003 728 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 SNORA31.1-201ENST00000515993 133 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 SNORA31.5-201ENST00000516190 133 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 RNA5SP291-201ENST00000517222 105 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AL356057.1-201ENST00000533798 831 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 NCAPGP2-201ENST00000557911 754 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AC012414.6-201ENST00000568241 401 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.09□□□□□ -1.91
CPNE1Q99829 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.09□□□□□ -1.91
CPNE1Q99829 AC025594.3-201ENST00000613068 790 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 AC100793.4-201ENST00000613683 429 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 OR5H6-203ENST00000642105 978 ntBASIC3.09□□□□□ -1.91
CPNE1Q99829 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CPNE1Q99829 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.09□□□□□ -1.92
CPNE1Q99829 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.08□□□□□ -1.92
CPNE1Q99829 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CPNE1Q99829 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.08□□□□□ -1.92
CPNE1Q99829 SNORD15B-201ENST00000384714 146 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 PTMAP2-201ENST00000397627 327 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 MIR1302-8-201ENST00000408342 128 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 HMGN1P14-201ENST00000412459 517 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 Z85995.1-201ENST00000415547 335 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 RPS15AP12-201ENST00000419498 388 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.08□□□□□ -1.92
CPNE1Q99829 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC091390.3-201ENST00000426478 338 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.08□□□□□ -1.92
CPNE1Q99829 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.08□□□□□ -1.92
CPNE1Q99829 AL512844.2-201ENST00000433990 593 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC244505.4-201ENST00000434905 287 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.08□□□□□ -1.92
CPNE1Q99829 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 HIGD1AP11-201ENST00000438361 280 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 SSXP5-201ENST00000443473 287 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.08□□□□□ -1.92
CPNE1Q99829 CYCSP35-201ENST00000451978 304 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.08□□□□□ -1.92
CPNE1Q99829 RNU6-420P-201ENST00000458780 107 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 RPL7P5-201ENST00000471472 736 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.08□□□□□ -1.92
CPNE1Q99829 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CPNE1Q99829 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.08□□□□□ -1.92
CPNE1Q99829 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.08□□□□□ -1.92
CPNE1Q99829 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.08□□□□□ -1.92
CPNE1Q99829 MTND5P13-201ENST00000513046 1079 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 RNU6-1282P-201ENST00000516735 96 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 RNU6-711P-201ENST00000517255 106 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.08□□□□□ -1.92
CPNE1Q99829 ATP5F1P5-201ENST00000526403 760 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.08□□□□□ -1.92
CPNE1Q99829 AP003181.2-201ENST00000528941 181 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AP003122.4-201ENST00000530980 758 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.08□□□□□ -1.92
CPNE1Q99829 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.08□□□□□ -1.92
CPNE1Q99829 HMGB1P14-201ENST00000557424 591 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 MIR3609-201ENST00000582661 80 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC009977.1-201ENST00000586015 570 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 HMGN1P30-201ENST00000589286 268 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC010620.1-201ENST00000601088 1102 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 HSPE1P7-201ENST00000604681 321 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC239868.4-201ENST00000608318 671 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AL158063.1-201ENST00000615349 536 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AC006338.1-201ENST00000618453 749 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 Z69908.1-201ENST00000622603 247 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 AL603839.4-201ENST00000624658 1005 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.08□□□□□ -1.92
CPNE1Q99829 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.08□□□□□ -1.92
CPNE1Q99829 MIR622-201ENST00000638396 96 ntBASIC3.08□□□□□ -1.92
CPNE1Q99829 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CPNE1Q99829 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CPNE1Q99829 AL049641.1-201ENST00000441055 1948 ntBASIC3.07□□□□□ -1.92
CPNE1Q99829 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
CPNE1Q99829 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CPNE1Q99829 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms