Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU1-101P-201ENST00000391171 127 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AL512661.1-201ENST00000434586 1253 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.92□□□□□ -2.26
COL12A1Q99715 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.92□□□□□ -2.26
COL12A1Q99715 AL133393.1-201ENST00000603277 287 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC0.92□□□□□ -2.26
COL12A1Q99715 AC004808.1-201ENST00000627671 721 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
COL12A1Q99715 RNY4P3-201ENST00000365254 95 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.92□□□□□ -2.26
COL12A1Q99715 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.92□□□□□ -2.26
COL12A1Q99715 AC099336.2-201ENST00000422457 254 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC012170.1-201ENST00000495139 359 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 SNORA48.9-201ENST00000516419 162 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.92□□□□□ -2.26
COL12A1Q99715 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC0.92□□□□□ -2.26
COL12A1Q99715 MIR7974-201ENST00000615835 79 ntBASIC0.92□□□□□ -2.26
COL12A1Q99715 MIR409-201ENST00000362237 79 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC0.91□□□□□ -2.26
COL12A1Q99715 MTND2P16-201ENST00000419987 799 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 MRPS36P1-201ENST00000421291 307 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.91□□□□□ -2.26
COL12A1Q99715 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC0.91□□□□□ -2.26
COL12A1Q99715 ARPC3P2-201ENST00000457786 533 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.91□□□□□ -2.26
COL12A1Q99715 PRELID3BP4-201ENST00000515476 571 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 MIR514B-201ENST00000516774 80 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.91□□□□□ -2.26
COL12A1Q99715 RNU6-222P-201ENST00000362438 107 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 SNORD56.5-201ENST00000364281 72 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.91□□□□□ -2.26
COL12A1Q99715 AC000111.3-201ENST00000433478 193 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 RPS27P1-201ENST00000450552 247 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.91□□□□□ -2.26
COL12A1Q99715 AC093852.1-201ENST00000503587 266 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 AC087808.1-201ENST00000520501 361 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 AC011468.4-201ENST00000603942 409 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 MIR6857-201ENST00000613267 93 ntBASIC0.91□□□□□ -2.26
COL12A1Q99715 AC068700.1-201ENST00000565862 3754 ntBASIC0.9□□□□□ -2.26
COL12A1Q99715 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
COL12A1Q99715 Y_RNA.488-201ENST00000384403 102 ntBASIC0.9□□□□□ -2.26
COL12A1Q99715 MIR124-3-201ENST00000384866 87 ntBASIC0.9□□□□□ -2.26
COL12A1Q99715 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC0.9□□□□□ -2.26
COL12A1Q99715 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.9□□□□□ -2.26
COL12A1Q99715 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.9□□□□□ -2.26
COL12A1Q99715 SNORA31.16-201ENST00000516773 139 ntBASIC0.9□□□□□ -2.26
COL12A1Q99715 AC239860.2-201ENST00000525886 270 ntBASIC0.9□□□□□ -2.26
COL12A1Q99715 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.26
COL12A1Q99715 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.9□□□□□ -2.26
COL12A1Q99715 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
COL12A1Q99715 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.9□□□□□ -2.27
COL12A1Q99715 RNA5SP193-201ENST00000410353 107 ntBASIC0.9□□□□□ -2.27
COL12A1Q99715 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.9□□□□□ -2.27
COL12A1Q99715 MTND2P9-201ENST00000422293 931 ntBASIC0.9□□□□□ -2.27
COL12A1Q99715 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.9□□□□□ -2.27
COL12A1Q99715 RNA5SP233-201ENST00000459153 113 ntBASIC0.9□□□□□ -2.27
COL12A1Q99715 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.9□□□□□ -2.27
COL12A1Q99715 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.9□□□□□ -2.27
COL12A1Q99715 AC025918.2-201ENST00000558683 763 ntBASIC0.9□□□□□ -2.27
COL12A1Q99715 AC103710.2-202ENST00000641454 2853 ntBASIC0.9□□□□□ -2.27
COL12A1Q99715 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.9□□□□□ -2.27
COL12A1Q99715 AC131280.1-202ENST00000624067 4211 ntBASIC0.9□□□□□ -2.27
COL12A1Q99715 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC0.9□□□□□ -2.27
COL12A1Q99715 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.9□□□□□ -2.27
COL12A1Q99715 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.9□□□□□ -2.27
COL12A1Q99715 AP000949.1-201ENST00000438328 629 ntBASIC0.9□□□□□ -2.27
COL12A1Q99715 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL12A1Q99715 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.89□□□□□ -2.27
COL12A1Q99715 RPL7P27-201ENST00000403775 720 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 PTP4A1P1-201ENST00000420539 515 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AC016691.1-201ENST00000441321 413 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.89□□□□□ -2.27
COL12A1Q99715 AC022493.1-201ENST00000492984 337 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
COL12A1Q99715 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AC019070.1-201ENST00000415008 1024 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 Z75741.2-201ENST00000417272 1167 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 IPO7P1-201ENST00000442031 636 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AL121871.1-201ENST00000443413 436 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AC022431.1-201ENST00000450941 438 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AK3P2-201ENST00000507976 429 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 SNORA31.23-201ENST00000517219 133 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.89□□□□□ -2.27
COL12A1Q99715 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.89□□□□□ -2.27
COL12A1Q99715 AL132857.1-201ENST00000555180 708 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AC091057.2-201ENST00000602594 792 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 AC010200.2-201ENST00000605098 235 ntBASIC0.89□□□□□ -2.27
COL12A1Q99715 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
COL12A1Q99715 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
COL12A1Q99715 Y_RNA.457-201ENST00000384237 111 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 MIR936-201ENST00000401264 98 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.88□□□□□ -2.27
COL12A1Q99715 MORF4L1P7-201ENST00000426038 703 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.88□□□□□ -2.27
COL12A1Q99715 HMGB3P21-201ENST00000452483 547 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC0.88□□□□□ -2.27
COL12A1Q99715 AP004247.1-201ENST00000531556 1289 ntBASIC0.88□□□□□ -2.27
COL12A1Q99715 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.88□□□□□ -2.27
COL12A1Q99715 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.88□□□□□ -2.27
COL12A1Q99715 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms