Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GLUD1P4-201ENST00000590914 418 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 RPS15AP11-201ENST00000594193 385 ntBASIC2.03□□□□□ -2.08
IFT140Q96RY7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
IFT140Q96RY7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.03□□□□□ -2.08
IFT140Q96RY7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
IFT140Q96RY7 AC068700.1-201ENST00000565862 3754 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 SNORA18.2-201ENST00000383865 132 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 AC234781.2-201ENST00000426370 994 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.02□□□□□ -2.09
IFT140Q96RY7 RPL23AP41-201ENST00000484754 458 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 AC021146.8-201ENST00000507455 733 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.02□□□□□ -2.09
IFT140Q96RY7 RNA5SP61-201ENST00000516453 100 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 RNA5SP471-201ENST00000516971 106 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 AC009127.3-201ENST00000570531 403 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 AC098657.3-201ENST00000620434 263 ntBASIC2.02□□□□□ -2.09
IFT140Q96RY7 UBE2FP3-201ENST00000436366 524 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.01□□□□□ -2.09
IFT140Q96RY7 TPMTP4-201ENST00000450749 678 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.01□□□□□ -2.09
IFT140Q96RY7 RNU6-1073P-201ENST00000517182 106 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC024619.4-201ENST00000580924 316 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.01□□□□□ -2.09
IFT140Q96RY7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.01□□□□□ -2.09
IFT140Q96RY7 RNU4-91P-201ENST00000364778 135 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AL022400.1-201ENST00000423946 935 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC096632.1-201ENST00000427395 310 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AL031663.1-201ENST00000437445 219 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 HMGB1P38-201ENST00000490557 577 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC010928.2-201ENST00000588017 287 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 AC116618.1-201ENST00000634617 774 ntBASIC2.01□□□□□ -2.09
IFT140Q96RY7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
IFT140Q96RY7 RNU4-72P-201ENST00000410754 173 ntBASIC2□□□□□ -2.09
IFT140Q96RY7 AIMP1P2-201ENST00000425294 312 ntBASIC2□□□□□ -2.09
IFT140Q96RY7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC2□□□□□ -2.09
IFT140Q96RY7 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2□□□□□ -2.09
IFT140Q96RY7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
IFT140Q96RY7 AC015726.3-201ENST00000624501 418 ntBASIC2□□□□□ -2.09
IFT140Q96RY7 MIR4496-201ENST00000635896 61 ntBASIC2□□□□□ -2.09
IFT140Q96RY7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2□□□□□ -2.09
IFT140Q96RY7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.99□□□□□ -2.09
IFT140Q96RY7 AC016769.3-201ENST00000396562 315 ntBASIC1.99□□□□□ -2.09
IFT140Q96RY7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.99□□□□□ -2.09
IFT140Q96RY7 ARL5AP3-201ENST00000439327 386 ntBASIC1.99□□□□□ -2.09
IFT140Q96RY7 AL445687.1-201ENST00000439946 251 ntBASIC1.99□□□□□ -2.09
IFT140Q96RY7 AL139109.1-201ENST00000455491 297 ntBASIC1.99□□□□□ -2.09
IFT140Q96RY7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.99□□□□□ -2.09
IFT140Q96RY7 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.99□□□□□ -2.09
IFT140Q96RY7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
IFT140Q96RY7 AC114322.1-201ENST00000506771 926 ntBASIC1.99□□□□□ -2.09
IFT140Q96RY7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.99□□□□□ -2.09
IFT140Q96RY7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.99□□□□□ -2.09
IFT140Q96RY7 AC055764.2-201ENST00000610089 670 ntBASIC1.99□□□□□ -2.09
IFT140Q96RY7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.99□□□□□ -2.09
IFT140Q96RY7 AC130650.2-201ENST00000618736 2403 ntBASIC1.99□□□□□ -2.09
IFT140Q96RY7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
IFT140Q96RY7 AP001350.1-201ENST00000601906 1524 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 RNU6-335P-201ENST00000364563 113 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 RNU6-1105P-201ENST00000384774 107 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 AL591034.1-201ENST00000407447 340 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 HMGN1P14-201ENST00000412459 517 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.98□□□□□ -2.09
IFT140Q96RY7 SNRPEP10-201ENST00000420249 274 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 TRIM60P13-201ENST00000432350 1283 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 AC023347.2-201ENST00000433994 462 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 RPL35AP22-201ENST00000436855 335 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 AL513343.1-201ENST00000451818 792 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 AC023790.1-201ENST00000482174 347 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 MTCO3P35-201ENST00000485582 781 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 KLRA1P-201ENST00000503499 986 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.98□□□□□ -2.09
IFT140Q96RY7 MTND3P24-201ENST00000506306 329 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.98□□□□□ -2.09
IFT140Q96RY7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.98□□□□□ -2.09
IFT140Q96RY7 AC099654.7-201ENST00000635788 2127 ntBASIC1.98□□□□□ -2.09
IFT140Q96RY7 Y_RNA.30-201ENST00000362572 97 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 RNU6-666P-201ENST00000363499 107 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 AC108059.3-201ENST00000456388 214 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.97□□□□□ -2.09
IFT140Q96RY7 RNU2-44P-201ENST00000516795 194 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
IFT140Q96RY7 MTCO1P40-201ENST00000574371 625 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 MIR3122-201ENST00000577243 73 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 AC115085.1-201ENST00000588924 229 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 AL449363.1-201ENST00000617815 186 ntBASIC1.97□□□□□ -2.09
IFT140Q96RY7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
IFT140Q96RY7 DDX43P2-201ENST00000604753 1354 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 AC007342.9-201ENST00000623877 1385 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 RNU6-50P-201ENST00000362356 103 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 RNA5SP391-201ENST00000363456 119 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 AL583843.1-201ENST00000456070 346 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 RPS23P3-201ENST00000470993 430 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
IFT140Q96RY7 AC087343.1-201ENST00000477341 475 ntBASIC1.96□□□□□ -2.1
IFT140Q96RY7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.96□□□□□ -2.1
IFT140Q96RY7 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.96□□□□□ -2.1
IFT140Q96RY7 RNU6-405P-201ENST00000516637 110 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms