Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 NRBF2P5-201ENST00000603087 788 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC006270.3-201ENST00000605967 1036 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 AC245517.5-201ENST00000611529 162 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.64□□□□□ -1.99
RPRD1AQ96P16 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
RPRD1AQ96P16 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 Y_RNA.192-201ENST00000363977 102 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 SNORA23-201ENST00000365128 182 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 RNU1-100P-201ENST00000365255 165 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 RNU6-114P-201ENST00000384704 105 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AL356421.1-201ENST00000403255 413 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AL136310.1-201ENST00000404926 654 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 RNU4-22P-201ENST00000411058 166 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 MTATP6P20-201ENST00000414147 562 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 RPS3AP37-201ENST00000419176 745 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 ZYG11AP1-201ENST00000430329 837 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AC236972.1-201ENST00000433225 199 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 ATP5F1P1-201ENST00000433775 569 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 CR769767.1-201ENST00000436337 346 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 Z82210.1-201ENST00000440037 231 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 EEF1A1P39-201ENST00000440791 250 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 ATG12P2-201ENST00000456830 416 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 RNU7-23P-201ENST00000459465 62 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 MTND4LP3-201ENST00000468320 276 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 RNA5SP148-201ENST00000516527 94 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 CKS1BP7-201ENST00000522230 235 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 TRAV28-201ENST00000557548 323 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AC234778.2-201ENST00000566241 354 ntBASIC2.63□□□□□ -1.99
RPRD1AQ96P16 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RPRD1AQ96P16 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 RNU6-289P-201ENST00000364093 107 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 RNU6-777P-201ENST00000364265 104 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 RNU6-744P-201ENST00000365557 107 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 RNU6-741P-201ENST00000383889 107 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 RNU6-1316P-201ENST00000384242 108 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 Y_RNA.500-201ENST00000384466 111 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 TAS2R15P-201ENST00000390674 928 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AL109755.1-201ENST00000401791 649 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AL513175.2-201ENST00000422071 443 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC092047.1-201ENST00000424997 240 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 COX7BP2-201ENST00000437976 242 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC009296.1-201ENST00000443146 155 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 EEF1E1P1-201ENST00000446998 430 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 RPS3P1-201ENST00000456781 192 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC114781.4-201ENST00000513707 639 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 RNU6-840P-201ENST00000517275 65 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AP000889.1-201ENST00000530968 660 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 ELOCP31-201ENST00000540463 467 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC023813.2-201ENST00000564321 469 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC004987.4-201ENST00000603383 338 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AL158050.2-201ENST00000605336 568 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC026790.2-201ENST00000606282 430 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AL121652.1-201ENST00000608851 448 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC245297.2-201ENST00000610119 565 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 AC109809.1-201ENST00000619665 545 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.62□□□□□ -1.99
RPRD1AQ96P16 MIR4275-201ENST00000636486 87 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 CR848007.1-201ENST00000442354 1699 ntBASIC2.62□□□□□ -1.99
RPRD1AQ96P16 DDX43P2-201ENST00000604753 1354 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC092447.10-201ENST00000620607 1652 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 MIR122-201ENST00000385044 85 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 MIR27B-201ENST00000385129 97 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 RPS4XP7-201ENST00000406274 780 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AL513475.1-201ENST00000406602 315 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AC080125.1-201ENST00000414888 684 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 MTCYBP38-201ENST00000417160 1123 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.61□□□□□ -1.99
RPRD1AQ96P16 RPS25P9-201ENST00000435591 252 ntBASIC2.61□□□□□ -1.99
RPRD1AQ96P16 AL049734.2-201ENST00000441066 616 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms