Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 AC068135.2-201ENST00000569293 1028 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC004805.2-201ENST00000605382 482 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC005332.10-201ENST00000612725 619 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 AC099842.1-201ENST00000619919 596 ntBASIC3.22□□□□□ -1.89
CMTM3Q96MX0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
CMTM3Q96MX0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
CMTM3Q96MX0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 Y_RNA.22-201ENST00000362492 102 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 SNORA73.2-201ENST00000364946 201 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 RNU6-1119P-201ENST00000384349 108 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 RN7SKP33-201ENST00000410942 340 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC069157.1-201ENST00000421749 137 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AL451062.2-201ENST00000427515 271 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 OR2B8P-201ENST00000432841 938 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 BX679664.1-201ENST00000434429 253 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 RPL12P25-201ENST00000455592 494 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC104472.2-201ENST00000469035 601 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC021205.2-201ENST00000480069 347 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC026427.2-201ENST00000506228 536 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 RN7SKP298-201ENST00000515950 94 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AP006245.1-201ENST00000522549 120 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC068831.4-201ENST00000556118 109 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC068790.2-201ENST00000602601 557 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 SNORA62.6-201ENST00000606322 83 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AL589743.7-201ENST00000612637 233 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC091834.1-201ENST00000614543 472 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AL161629.2-201ENST00000615347 275 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 MIR7641-1-201ENST00000627518 61 ntBASIC3.21□□□□□ -1.9
CMTM3Q96MX0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CMTM3Q96MX0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC068647.1-201ENST00000489539 2265 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 MIR383-201ENST00000362257 73 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 RNU6-799P-201ENST00000363567 107 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 RNU4-24P-201ENST00000364565 139 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 RNU1-64P-201ENST00000365443 163 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC016907.1-201ENST00000419483 435 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC133104.1-201ENST00000429100 218 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 GPR143P-201ENST00000434155 205 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 HSPD1P21-201ENST00000436541 245 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC079781.2-201ENST00000446424 169 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC079448.1-201ENST00000449377 373 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC093899.1-201ENST00000457984 376 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 UQCRHP4-201ENST00000471686 272 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC105252.1-201ENST00000503089 286 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC110768.1-201ENST00000509222 400 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC117522.1-201ENST00000509821 380 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 MTND3P5-201ENST00000512798 333 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 RNA5SP208-201ENST00000516156 78 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 RNU2-27P-201ENST00000516185 142 ntBASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
CMTM3Q96MX0 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms