Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 HSPE1P7-201ENST00000604681 321 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AP000943.4-201ENST00000622912 357 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USP47Q96K76 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
USP47Q96K76 Y_RNA.25-201ENST00000362528 102 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
USP47Q96K76 MIR583-201ENST00000384846 75 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AL079342.2-201ENST00000403367 482 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.74□□□□□ -1.97
USP47Q96K76 SPA17P1-201ENST00000416656 452 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
USP47Q96K76 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.74□□□□□ -1.97
USP47Q96K76 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.74□□□□□ -1.97
USP47Q96K76 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 ARF4P4-201ENST00000439608 520 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.74□□□□□ -1.97
USP47Q96K76 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 AC092902.1-201ENST00000486999 259 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
USP47Q96K76 ARL4AP2-201ENST00000507378 601 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 AC087897.1-201ENST00000550134 156 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
USP47Q96K76 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
USP47Q96K76 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.74□□□□□ -1.97
USP47Q96K76 MTND4LP25-201ENST00000570218 163 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC008507.2-201ENST00000588402 1176 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC002984.1-201ENST00000591692 448 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AL121917.1-203ENST00000605534 577 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AC244517.12-201ENST00000623581 663 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 AP003122.6-201ENST00000623831 495 ntBASIC2.74□□□□□ -1.97
USP47Q96K76 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
USP47Q96K76 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
USP47Q96K76 RNU6-14P-201ENST00000384630 106 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 RPS7P9-201ENST00000414704 586 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 BEND7P1-201ENST00000422058 457 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 AC019178.2-201ENST00000423595 505 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 MTCO1P3-201ENST00000429327 192 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 EZH2P1-201ENST00000431167 291 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.73□□□□□ -1.97
USP47Q96K76 AC024082.2-201ENST00000434771 238 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.73□□□□□ -1.97
USP47Q96K76 AC003989.2-201ENST00000440224 169 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 MTCYBP42-201ENST00000444653 1130 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.73□□□□□ -1.97
USP47Q96K76 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.73□□□□□ -1.97
USP47Q96K76 RPL31P60-201ENST00000478450 367 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.73□□□□□ -1.97
USP47Q96K76 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.73□□□□□ -1.97
USP47Q96K76 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.73□□□□□ -1.97
USP47Q96K76 AC092451.2-201ENST00000538746 658 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.73□□□□□ -1.97
USP47Q96K76 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.73□□□□□ -1.97
USP47Q96K76 AC015688.2-201ENST00000584523 262 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 AC013444.2-201ENST00000603317 787 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 AC097504.2-201ENST00000608088 454 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 AL138880.2-201ENST00000616214 239 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 AC004009.2-201ENST00000623016 728 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 AC010872.1-201ENST00000624225 675 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 MKKS-204ENST00000639674 192 ntBASIC2.73□□□□□ -1.97
USP47Q96K76 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
USP47Q96K76 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
USP47Q96K76 AC010680.1-201ENST00000590024 3590 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 RNU6-799P-201ENST00000363567 107 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.72□□□□□ -1.97
USP47Q96K76 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.72□□□□□ -1.97
USP47Q96K76 C1DP1-201ENST00000426049 402 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AL590233.1-201ENST00000430017 456 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC109583.1-201ENST00000432156 268 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC092427.1-201ENST00000439177 601 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.72□□□□□ -1.97
USP47Q96K76 RPL39P6-201ENST00000448289 150 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC079776.3-201ENST00000450665 370 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AL353691.1-201ENST00000451332 387 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC233279.1-201ENST00000455300 423 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 SUMO2P2-201ENST00000456482 255 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC104164.3-201ENST00000467363 1258 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC023424.2-201ENST00000493479 777 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.72□□□□□ -1.97
USP47Q96K76 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.72□□□□□ -1.97
USP47Q96K76 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
USP47Q96K76 AK6P1-201ENST00000540219 478 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 GLUD1P4-201ENST00000590914 418 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC093673.2-201ENST00000609674 331 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC124016.2-201ENST00000610058 665 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC005332.6-201ENST00000613178 446 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC010975.3-201ENST00000618727 978 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC109454.4-201ENST00000623411 649 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 AC090617.7-201ENST00000623952 126 ntBASIC2.72□□□□□ -1.97
USP47Q96K76 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.72□□□□□ -1.97
USP47Q96K76 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.72□□□□□ -1.97
USP47Q96K76 AC009812.4-201ENST00000569134 1805 ntBASIC2.71□□□□□ -1.97
USP47Q96K76 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP47Q96K76 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
USP47Q96K76 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.71□□□□□ -1.98
USP47Q96K76 SNRPEP3-201ENST00000338402 276 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 Y_RNA.226-201ENST00000364337 114 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 MIR506-201ENST00000384998 124 ntBASIC2.71□□□□□ -1.98
USP47Q96K76 RNU2-42P-201ENST00000410697 113 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms