Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU6-1322P-201ENST00000364309 107 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-641P-201ENST00000384006 107 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 MTATP6P4-201ENST00000427725 675 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC000111.3-201ENST00000433478 193 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 RPL26P6-201ENST00000440913 438 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 RPS27AP1-201ENST00000475545 471 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 RN7SKP13-201ENST00000515933 244 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 SNORA31.8-201ENST00000516327 108 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC104383.1-201ENST00000530297 370 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC008011.1-201ENST00000545989 227 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 OR4H12P-201ENST00000556269 907 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 HMGB1P6-201ENST00000569046 646 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC007621.1-201ENST00000604544 437 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC012443.1-201ENST00000605605 231 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC093788.1-201ENST00000609356 927 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC110801.1-201ENST00000623590 212 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 MIR1321-201ENST00000637766 79 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 AC092326.2-201ENST00000624772 1561 ntBASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CDK5RAP3Q96JB5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-188P-201ENST00000364207 107 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 Y_RNA.367-201ENST00000365544 101 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AL359634.1-202ENST00000404721 284 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 RNU2-39P-201ENST00000410604 198 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 MRPL50P2-201ENST00000416821 482 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 SDCBPP3-201ENST00000419629 891 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 YPEL5P1-201ENST00000419731 367 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 MTND4LP11-201ENST00000422184 280 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC122718.1-201ENST00000439448 744 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 NFU1P2-201ENST00000448700 469 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 FDX1P2-201ENST00000450769 375 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 RN7SL93P-201ENST00000463035 293 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 FAM133DP-201ENST00000464802 691 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 HSPD1P15-201ENST00000505573 1122 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 RNU6-1281P-201ENST00000516223 105 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC134698.4-201ENST00000523451 826 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 MTND1P35-201ENST00000526739 508 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC034105.3-201ENST00000565294 442 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 MIR5187-201ENST00000583479 76 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC006116.10-201ENST00000591836 581 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC104458.1-201ENST00000608243 463 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC005609.4-201ENST00000625071 447 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AP000553.6-201ENST00000641242 118 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AC007256.1-201ENST00000392253 2765 ntBASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP3Q96JB5 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.15□□□□□ -1.74
CDK5RAP3Q96JB5 PRO1804-201ENST00000623780 2050 ntBASIC4.15□□□□□ -1.74
CDK5RAP3Q96JB5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CDK5RAP3Q96JB5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.15□□□□□ -1.74
CDK5RAP3Q96JB5 CEP170P1-201ENST00000502249 4587 ntBASIC4.15□□□□□ -1.74
CDK5RAP3Q96JB5 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDK5RAP3Q96JB5 AC004520.1-201ENST00000608362 1413 ntBASIC4.15□□□□□ -1.74
CDK5RAP3Q96JB5 AC073343.1-201ENST00000328239 651 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 RNU1-18P-201ENST00000363062 164 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 Y_RNA.573-201ENST00000384763 105 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 AL590704.1-201ENST00000402856 794 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 AC009237.5-201ENST00000414271 501 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 AC093106.2-201ENST00000428212 385 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 USP12PX-201ENST00000432383 1057 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 AL606489.2-201ENST00000433886 234 ntBASIC4.15□□□□□ -1.75
CDK5RAP3Q96JB5 MTATP6P16-201ENST00000434543 526 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms