Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 SMG1P4-204ENST00000523028 4131 ntBASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VTI1AQ96AJ9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 Y_RNA.151-201ENST00000363566 112 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 RNU6-99P-201ENST00000364721 107 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 SNORA41-201ENST00000384675 132 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 RNU6-823P-201ENST00000391042 103 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 RNU6-817P-201ENST00000391083 104 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 RNU6-1109P-201ENST00000391187 107 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AC096664.2-201ENST00000411843 406 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 RPS12P23-201ENST00000419579 400 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AL645568.3-201ENST00000433683 316 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 HSFY6P-201ENST00000445573 403 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 Y_RNA.668-201ENST00000516233 93 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 SNORA31.22-201ENST00000517204 135 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 RPL23AP87-202ENST00000573039 466 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 MIR4715-201ENST00000584117 79 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 FAM27B-201ENST00000610601 213 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AC107871.2-201ENST00000612894 502 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 MIR6830-201ENST00000636015 70 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 AC100778.3-201ENST00000580060 1750 ntBASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VTI1AQ96AJ9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 RNU6-379P-201ENST00000363813 104 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 RNU2-23P-201ENST00000410545 195 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 RNU6-293P-201ENST00000411259 106 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 AL158071.1-201ENST00000430315 461 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 RPL23AP50-201ENST00000434149 455 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 RPL7AP61-201ENST00000443410 636 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 BTF3P6-201ENST00000448054 499 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 AL353752.1-201ENST00000454946 260 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 RNU7-138P-201ENST00000459479 64 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 Y_RNA.721-201ENST00000517207 102 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 AC084783.1-201ENST00000565846 910 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 AC136624.4-201ENST00000573044 370 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 AC005951.2-201ENST00000576282 495 ntBASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VTI1AQ96AJ9 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC000123.3-201ENST00000624029 4975 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 RN7SKP227-201ENST00000364445 330 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 MIR124-3-201ENST00000384866 87 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 MIR517A-201ENST00000385001 87 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 RNU6-847P-201ENST00000411115 108 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC114755.2-201ENST00000413520 361 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 RPL21P90-201ENST00000415692 466 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 UBE2V1P4-201ENST00000425374 344 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC016831.4-201ENST00000438302 307 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 RNU6-953P-201ENST00000459154 107 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 RNU6-475P-201ENST00000516073 104 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC008694.2-201ENST00000517591 306 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC090151.1-201ENST00000520784 730 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC074050.1-201ENST00000563247 211 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AC005899.2-201ENST00000584353 90 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AL606534.2-204ENST00000635008 178 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 AL133412.1-201ENST00000380194 2992 ntBASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC5.47□□□□□ -1.53
VTI1AQ96AJ9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.46□□□□□ -1.53
VTI1AQ96AJ9 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
VTI1AQ96AJ9 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
VTI1AQ96AJ9 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
VTI1AQ96AJ9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VTI1AQ96AJ9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms