Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RPL7P10-201ENST00000417407 739 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AL391219.1-201ENST00000422570 483 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF1Q92994 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.81□□□□□ -1.64
BRF1Q92994 AC069285.2-201ENST00000440210 275 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.81□□□□□ -1.64
BRF1Q92994 MTCO3P45-201ENST00000443036 613 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AL590399.6-201ENST00000446396 307 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 GAPDHP27-201ENST00000447427 1020 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 NUTF2P3-201ENST00000448540 384 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 RPL21P93-201ENST00000480465 489 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AL163540.1-201ENST00000485382 386 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AC083829.1-201ENST00000503756 657 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRF1Q92994 RPL39P5-202ENST00000512505 151 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 RNA5SP454-201ENST00000517231 127 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRF1Q92994 APOOP3-201ENST00000536787 586 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AP000763.2-201ENST00000540641 163 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.81□□□□□ -1.64
BRF1Q92994 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRF1Q92994 MIR3672-201ENST00000584290 82 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 MIR5684-201ENST00000585074 65 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AC008521.1-201ENST00000587471 187 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.81□□□□□ -1.64
BRF1Q92994 AC104662.1-201ENST00000604448 511 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 AC008121.3-201ENST00000618726 433 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
BRF1Q92994 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
BRF1Q92994 MTCO1P12-201ENST00000414273 1543 ntBASIC4.81□□□□□ -1.64
BRF1Q92994 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
BRF1Q92994 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
BRF1Q92994 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRF1Q92994 ASNSP1-201ENST00000518311 1939 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.8□□□□□ -1.64
BRF1Q92994 AC022893.2-201ENST00000564832 3296 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 RNU6-254P-201ENST00000363377 107 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 SNORD35B-201ENST00000363660 87 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
BRF1Q92994 RNU6-946P-201ENST00000383878 107 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC004552.1-201ENST00000419089 348 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC093106.2-201ENST00000428212 385 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.8□□□□□ -1.64
BRF1Q92994 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.8□□□□□ -1.64
BRF1Q92994 FABP5P14-201ENST00000437273 393 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AF228730.2-201ENST00000438784 848 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.8□□□□□ -1.64
BRF1Q92994 AC008481.1-201ENST00000463278 396 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 RPS26P3-201ENST00000470205 348 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
BRF1Q92994 RPL7P43-201ENST00000478876 753 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC090543.2-201ENST00000483963 348 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC004057.1-201ENST00000485827 348 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 RN7SL604P-201ENST00000492589 296 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.8□□□□□ -1.64
BRF1Q92994 RPL29P14-201ENST00000495837 428 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 RPL23AP55-201ENST00000498163 452 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC025445.1-201ENST00000502728 300 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.8□□□□□ -1.64
BRF1Q92994 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.8□□□□□ -1.64
BRF1Q92994 RNU6-256P-201ENST00000516747 97 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.8□□□□□ -1.64
BRF1Q92994 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.8□□□□□ -1.64
BRF1Q92994 RANP3-201ENST00000530970 276 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 IMMP1LP2-201ENST00000552954 492 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC006270.2-201ENST00000578523 652 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 MIR3939-201ENST00000582614 106 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC023043.2-201ENST00000589678 1026 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC092747.3-201ENST00000603769 301 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AC040896.1-201ENST00000613819 479 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AL773545.4-201ENST00000637262 310 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 AL513478.4-201ENST00000641636 310 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRF1Q92994 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRF1Q92994 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
BRF1Q92994 AL592437.2-201ENST00000421655 2434 ntBASIC4.8□□□□□ -1.64
BRF1Q92994 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRF1Q92994 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
BRF1Q92994 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
BRF1Q92994 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
BRF1Q92994 Y_RNA.145-201ENST00000363527 102 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 Y_RNA.197-201ENST00000364004 102 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 SMIM11P1-201ENST00000369586 178 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 Y_RNA.445-201ENST00000384168 102 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 RNU6-1127P-201ENST00000384580 107 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 AL121834.1-202ENST00000404494 277 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 RNA5SP39-201ENST00000411245 120 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRF1Q92994 AL137014.1-201ENST00000420490 1226 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.79□□□□□ -1.64
BRF1Q92994 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 HMGB3P22-202ENST00000451823 572 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 SCARNA18-201ENST00000459004 134 ntBASIC4.79□□□□□ -1.64
BRF1Q92994 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.79□□□□□ -1.64
BRF1Q92994 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
BRF1Q92994 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms