Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.68□□□□□ -2.14
AP3S1Q92572 AL451007.1-201ENST00000595491 289 ntBASIC1.68□□□□□ -2.14
AP3S1Q92572 AC007938.3-201ENST00000604965 623 ntBASIC1.68□□□□□ -2.14
AP3S1Q92572 AC096577.2-201ENST00000611455 153 ntBASIC1.68□□□□□ -2.14
AP3S1Q92572 AP002791.1-201ENST00000623291 381 ntBASIC1.68□□□□□ -2.14
AP3S1Q92572 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
AP3S1Q92572 MTND5P30-201ENST00000452896 1731 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
AP3S1Q92572 RNU6-251P-201ENST00000363235 104 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 SNORD115-48-201ENST00000364764 76 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 XGY1-201ENST00000381172 446 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AL139156.1-201ENST00000412785 841 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 NUP35P1-201ENST00000422734 947 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AC096920.1-201ENST00000423991 241 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 PSMA6P3-201ENST00000428242 164 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 MED14P1-201ENST00000430517 648 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 ELOCP3-201ENST00000439303 348 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 TPT1P14-201ENST00000448018 505 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 ATG12P2-201ENST00000456830 416 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S1Q92572 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.67□□□□□ -2.14
AP3S1Q92572 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S1Q92572 AC020699.1-201ENST00000505161 445 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S1Q92572 LTV1P1-201ENST00000510683 1237 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S1Q92572 AC026801.2-201ENST00000515352 425 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
AP3S1Q92572 IGKV3-31-201ENST00000523109 329 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AP005639.2-201ENST00000527592 928 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 CBX3P7-201ENST00000532876 502 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.67□□□□□ -2.14
AP3S1Q92572 LINC00933-203ENST00000559812 219 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 MIR3126-201ENST00000577443 74 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 MIR5089-201ENST00000580047 84 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 MIR3618-201ENST00000580330 88 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AC007179.3-201ENST00000604976 235 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AC106052.1-201ENST00000608029 497 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AC104763.3-201ENST00000613765 618 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AC010378.1-201ENST00000619270 362 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AL445493.3-201ENST00000619568 477 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.67□□□□□ -2.14
AP3S1Q92572 AC025034.2-201ENST00000623264 286 ntBASIC1.67□□□□□ -2.14
AP3S1Q92572 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.67□□□□□ -2.14
AP3S1Q92572 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
AP3S1Q92572 SGO1P1-201ENST00000603525 1447 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 AC010889.1-201ENST00000566193 2666 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
AP3S1Q92572 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
AP3S1Q92572 RNA5SP276-201ENST00000362580 94 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 RNU6-619P-201ENST00000365146 108 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 MIR16-1-201ENST00000385271 89 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
AP3S1Q92572 MIR888-201ENST00000401186 77 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 U6atac.2-201ENST00000408644 118 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 EDDM3CP-201ENST00000415977 425 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 OR4K6P-201ENST00000416478 897 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.66□□□□□ -2.14
AP3S1Q92572 RPL30P4-201ENST00000429309 333 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 RPL23AP6-201ENST00000446637 472 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AC084024.2-201ENST00000503480 791 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 AF213884.2-201ENST00000510417 903 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AC007375.1-201ENST00000554513 578 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.66□□□□□ -2.14
AP3S1Q92572 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.66□□□□□ -2.14
AP3S1Q92572 AC243960.4-201ENST00000600532 288 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 AC068313.1-201ENST00000604028 1008 ntBASIC1.66□□□□□ -2.14
AP3S1Q92572 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.66□□□□□ -2.14
AP3S1Q92572 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.66□□□□□ -2.14
AP3S1Q92572 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.66□□□□□ -2.14
AP3S1Q92572 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
AP3S1Q92572 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.65□□□□□ -2.14
AP3S1Q92572 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.65□□□□□ -2.14
AP3S1Q92572 RNU6-234P-201ENST00000365229 104 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 SNORA36C-201ENST00000384289 132 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 SNORA48.7-201ENST00000391302 135 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 AL139098.1-201ENST00000407291 389 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 CCDC58P2-201ENST00000417131 366 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.65□□□□□ -2.15
AP3S1Q92572 AL445685.2-201ENST00000422551 342 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.65□□□□□ -2.15
AP3S1Q92572 AC093155.1-201ENST00000440164 826 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.65□□□□□ -2.15
AP3S1Q92572 PPP1R2P5-201ENST00000457256 603 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.65□□□□□ -2.15
AP3S1Q92572 HMGB1P36-201ENST00000487709 576 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC1.65□□□□□ -2.15
AP3S1Q92572 RNA5SP356-201ENST00000515972 94 ntBASIC1.65□□□□□ -2.15
AP3S1Q92572 RNA5SP291-201ENST00000517222 105 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms