Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AL445669.1-201ENST00000426743 755 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 SUMO1P4-201ENST00000429430 302 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 ARL5AP4-201ENST00000430731 512 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 MTND1P32-201ENST00000433043 938 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 Z80107.1-201ENST00000436830 412 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AL831737.1-201ENST00000441288 271 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 snoU13.8-201ENST00000458890 104 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 RPL37P25-201ENST00000507308 276 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 MRPS36P3-201ENST00000519284 130 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 CASP1P1-201ENST00000526345 212 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC243972.3-201ENST00000539655 198 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC105224.1-201ENST00000587055 421 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 UBE2L4-201ENST00000587688 464 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AL035413.2-201ENST00000604801 525 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AL160281.1-201ENST00000605307 311 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC112220.3-201ENST00000605502 502 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 OR2AS2P-201ENST00000606902 342 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AL158801.5-201ENST00000623123 465 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 AC092608.2-201ENST00000624427 218 ntBASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.09□□□□□ -2.07
RTN4IP1Q8WWV3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
RTN4IP1Q8WWV3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
RTN4IP1Q8WWV3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
RTN4IP1Q8WWV3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC005539.1-201ENST00000443768 1479 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 SNORA72.3-201ENST00000365074 132 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-114P-201ENST00000384704 105 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 MIR34A-201ENST00000385130 110 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL139039.1-201ENST00000401900 692 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 RNU2-52P-201ENST00000410680 190 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC098826.1-201ENST00000433943 471 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC092573.2-201ENST00000434546 243 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 MTCO1P27-201ENST00000448269 226 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 SNORD121B-201ENST00000458838 81 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC073901.1-201ENST00000462471 408 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC147055.4-201ENST00000504399 745 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 RNA5SP356-201ENST00000515972 94 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC005951.2-201ENST00000576282 495 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 MIR4319-201ENST00000577285 85 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL353997.4-201ENST00000586196 166 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC061975.8-201ENST00000587058 721 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL596327.1-201ENST00000603629 213 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC024560.3-201ENST00000608482 349 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC004067.1-201ENST00000608733 700 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL603758.1-201ENST00000618654 241 ntBASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RTN4IP1Q8WWV3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 FAM133CP-201ENST00000332869 704 ntBASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 AC062016.1-201ENST00000355719 319 ntBASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-97P-201ENST00000363387 104 ntBASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 RNU1-39P-201ENST00000383897 165 ntBASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 RNU6-76P-201ENST00000384060 104 ntBASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
RTN4IP1Q8WWV3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms