Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 AC022022.1-201ENST00000430304 178 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC090774.1-201ENST00000435925 246 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CHD6Q8TD26 HMGB3P30-201ENST00000457863 606 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 AL049838.1-201ENST00000563647 981 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC103710.2-202ENST00000641454 2853 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
CHD6Q8TD26 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 SNORA2A-201ENST00000383885 135 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 PRELID3BP11-201ENST00000414230 479 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC234064.1-201ENST00000436312 247 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 CASP3P1-201ENST00000446037 609 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC022493.1-201ENST00000492984 337 ntBASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.13□□□□□ -2.23
CHD6Q8TD26 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CHD6Q8TD26 AL357078.2-201ENST00000416486 427 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC004941.2-201ENST00000427009 228 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC008850.1-201ENST00000427546 362 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC114973.1-201ENST00000429057 632 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.12□□□□□ -2.23
CHD6Q8TD26 Y_RNA.700-201ENST00000516806 100 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC068714.1-201ENST00000559623 800 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC123912.5-201ENST00000605470 343 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC108706.1-201ENST00000611053 297 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 MIR4278-201ENST00000636094 69 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CHD6Q8TD26 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC090740.1-201ENST00000623193 2262 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC073264.1-201ENST00000411508 416 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 TRGV6-201ENST00000417928 299 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD6Q8TD26 SNORD108-201ENST00000459332 71 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC012170.1-201ENST00000495139 359 ntBASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD6Q8TD26 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.12□□□□□ -2.23
CHD6Q8TD26 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHD6Q8TD26 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.11□□□□□ -2.23
CHD6Q8TD26 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.11□□□□□ -2.23
CHD6Q8TD26 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHD6Q8TD26 RPL7P31-201ENST00000450192 724 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 HSPE1P22-201ENST00000456856 327 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 MTCO1P30-201ENST00000515244 580 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 RNA5SP285-201ENST00000516619 119 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 MTCO3P24-201ENST00000572729 782 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 RNU1-148P-201ENST00000384472 162 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 MIR1912-201ENST00000410389 80 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 RNA5SP489-201ENST00000410986 109 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
CHD6Q8TD26 AC092902.1-201ENST00000486999 259 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.11□□□□□ -2.23
CHD6Q8TD26 AC096571.1-202ENST00000506634 735 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.11□□□□□ -2.23
CHD6Q8TD26 AL391261.3-201ENST00000557194 520 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 MIR6759-201ENST00000638110 65 ntBASIC1.11□□□□□ -2.23
CHD6Q8TD26 MTCO1P43-201ENST00000431831 488 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.1□□□□□ -2.23
CHD6Q8TD26 UBE2V1P13-201ENST00000436983 439 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 RN7SKP5-201ENST00000517045 272 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 ACTR3BP3-201ENST00000565577 979 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 AL512605.2-201ENST00000592972 256 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 AC006270.3-201ENST00000605967 1036 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHD6Q8TD26 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CHD6Q8TD26 AC009302.1-201ENST00000417147 390 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 AC008427.1-201ENST00000503102 655 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 MIR4458-201ENST00000578872 75 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CHD6Q8TD26 DUXAP3-201ENST00000603616 594 ntBASIC1.1□□□□□ -2.23
CHD6Q8TD26 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.1□□□□□ -2.23
CHD6Q8TD26 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.1□□□□□ -2.23
CHD6Q8TD26 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.09□□□□□ -2.23
CHD6Q8TD26 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.09□□□□□ -2.23
CHD6Q8TD26 AC092451.1-201ENST00000480211 153 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 AC025755.1-201ENST00000521306 278 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 SMARCE1P4-201ENST00000523647 241 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.09□□□□□ -2.23
CHD6Q8TD26 AL590099.1-201ENST00000615276 138 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 DUXAP9-208ENST00000622815 614 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 RNA5SP167-201ENST00000365461 116 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 CCNB2P1-201ENST00000399411 1150 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 RNA5SP25-201ENST00000410815 110 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 PSMA2P3-201ENST00000429685 675 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.09□□□□□ -2.23
CHD6Q8TD26 AC084757.1-201ENST00000559987 490 ntBASIC1.09□□□□□ -2.23
CHD6Q8TD26 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CHD6Q8TD26 Y_RNA.170-201ENST00000363746 110 ntBASIC1.09□□□□□ -2.24
CHD6Q8TD26 RNU4-52P-201ENST00000384209 138 ntBASIC1.09□□□□□ -2.24
CHD6Q8TD26 RNU2-25P-201ENST00000411041 191 ntBASIC1.09□□□□□ -2.24
CHD6Q8TD26 SCARNA1-201ENST00000517138 166 ntBASIC1.09□□□□□ -2.24
CHD6Q8TD26 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.09□□□□□ -2.24
CHD6Q8TD26 MIR4512-201ENST00000583257 77 ntBASIC1.09□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 147 ms