Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC008033.2-201ENST00000542626 177 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 AC007458.1-201ENST00000542812 373 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 MIR4504-201ENST00000577413 92 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 PRPF19P1-201ENST00000584766 898 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 AL031601.2-202ENST00000622650 282 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 SAMMSON-226ENST00000642089 1582 ntBASIC6.09□□□□□ -1.43
NKX2-3Q8TAU0 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
NKX2-3Q8TAU0 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NKX2-3Q8TAU0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
NKX2-3Q8TAU0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 AC026523.2-201ENST00000625039 7739 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 MIR133A2-201ENST00000347538 102 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 UBE2WP1-201ENST00000362030 340 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 RNA5SP267-201ENST00000364893 126 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 RNU1-74P-201ENST00000384108 171 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 Y_RNA.623-201ENST00000411128 95 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 RPS23P10-201ENST00000416185 486 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 AL031736.2-201ENST00000426573 787 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 AC092573.2-201ENST00000434546 243 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 RN7SL354P-201ENST00000469282 294 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 AC093840.1-201ENST00000511599 336 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 RNU6-677P-201ENST00000516914 101 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 MIR4691-201ENST00000583764 85 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 MIR4737-201ENST00000583979 81 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
NKX2-3Q8TAU0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AL031119.1-201ENST00000404707 1879 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 SDAD1P1-202ENST00000524156 2051 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 Y_RNA.358-201ENST00000365491 99 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 SNORA40-201ENST00000388090 126 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 RN7SKP27-201ENST00000410684 333 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 RPL10P17-201ENST00000453852 316 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 SNORD2.1-201ENST00000458762 69 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 RN7SKP210-201ENST00000459176 261 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AC012123.2-201ENST00000485809 248 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 MRPS33P2-201ENST00000507850 322 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AP005660.1-201ENST00000522972 293 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AL590705.4-201ENST00000532209 134 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 MIR4679-2-201ENST00000578358 77 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AC006254.2-201ENST00000603259 279 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 SNORD113-5-201ENST00000607261 78 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 MIR6780A-201ENST00000615089 68 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AC073349.3-201ENST00000617616 186 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 AC020633.1-201ENST00000468439 2247 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 MAPK10-263ENST00000641052 4307 ntBASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
NKX2-3Q8TAU0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC079741.1-201ENST00000321498 212 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 MIR569-201ENST00000385228 96 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 SNORD78.2-201ENST00000391076 69 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 RN7SKP114-201ENST00000410327 279 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC069218.2-201ENST00000411665 344 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms