Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.4□□□□□ -1.7
SYNE4Q8N205 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYNE4Q8N205 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYNE4Q8N205 RNU6-169P-201ENST00000365336 107 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 U3.19-201ENST00000390893 196 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AL591416.1-201ENST00000404015 867 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AL162578.1-201ENST00000406202 378 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 RNA5SP118-201ENST00000410385 109 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 RPS15AP40-201ENST00000419621 391 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC092832.1-201ENST00000422934 400 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 PABPC1P3-201ENST00000469174 459 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC096576.1-201ENST00000489014 359 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC010587.1-201ENST00000505809 469 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 PCBP2P3-201ENST00000509726 843 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 RNU7-30P-201ENST00000516835 62 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC022616.3-201ENST00000523940 148 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYNE4Q8N205 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AL442663.2-201ENST00000554385 511 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 MIR4512-201ENST00000583257 77 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC010525.2-201ENST00000590920 195 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC021646.1-201ENST00000605469 484 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AL355472.4-201ENST00000610233 626 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 BMS1P21-201ENST00000634565 365 ntBASIC4.4□□□□□ -1.71
SYNE4Q8N205 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SYNE4Q8N205 AC011978.2-201ENST00000569835 2054 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE4Q8N205 RNU6-853P-201ENST00000364306 107 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 UBA52P6-201ENST00000399822 382 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AL354719.1-201ENST00000406535 843 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 RPS20P1-201ENST00000434853 354 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 RPL23AP74-201ENST00000437246 471 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC127537.2-201ENST00000439258 465 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 BNIP3P2-201ENST00000441221 577 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 CBWD4P-201ENST00000445695 655 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC005297.2-201ENST00000450430 606 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC084357.1-201ENST00000473404 255 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 PHBP14-201ENST00000512887 367 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 RNA5SP154-201ENST00000516193 111 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC099489.2-201ENST00000574976 260 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 Z84480.1-201ENST00000605131 311 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC009248.2-201ENST00000619826 254 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 RMST_7.1-201ENST00000621935 268 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.39□□□□□ -1.71
SYNE4Q8N205 CYP3A51P-201ENST00000633513 256 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 TPTEP1-208ENST00000636884 213 ntBASIC4.39□□□□□ -1.71
SYNE4Q8N205 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE4Q8N205 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE4Q8N205 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE4Q8N205 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE4Q8N205 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE4Q8N205 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SYNE4Q8N205 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE4Q8N205 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
SYNE4Q8N205 AC092125.1-201ENST00000562568 1995 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 SAGE4P-201ENST00000442271 3381 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 MTND5P3-201ENST00000438536 1800 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE4Q8N205 RNU6-223P-201ENST00000362830 107 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 Y_RNA.157-201ENST00000363638 102 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 SNORA51.2-201ENST00000364595 132 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SYNE4Q8N205 RNU6-74P-201ENST00000384235 107 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 MIR1-2-201ENST00000384961 85 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 AL031679.1-201ENST00000400616 525 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE4Q8N205 MTCO3P12-201ENST00000416718 547 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE4Q8N205 USP9YP15-201ENST00000442391 422 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 AC073587.1-201ENST00000447093 876 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.38□□□□□ -1.71
SYNE4Q8N205 HMGB3P21-201ENST00000452483 547 ntBASIC4.38□□□□□ -1.71
SYNE4Q8N205 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.38□□□□□ -1.71
SYNE4Q8N205 AC093767.1-201ENST00000504523 156 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms