Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL645937.1-202ENST00000421799 937 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AL139281.1-201ENST00000422120 335 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 COTL1P1-201ENST00000422309 375 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RPL7P46-201ENST00000425129 740 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RPL21P40-201ENST00000428586 483 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RPS20P5-201ENST00000434808 360 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RPL37P21-201ENST00000435890 276 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 LARP1BP3-201ENST00000437229 869 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC025750.2-201ENST00000442609 450 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 ZNF114P1-201ENST00000453500 292 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RNA5SP310-201ENST00000459084 116 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AP004217.1-201ENST00000480579 346 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AL049874.1-201ENST00000489560 388 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 GMPSP1-201ENST00000514075 579 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC116347.2-201ENST00000514912 523 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RNA5SP76-201ENST00000516277 87 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 LARP7P3-201ENST00000579888 337 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AP000403.1-201ENST00000603349 851 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AL137843.1-201ENST00000605078 385 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC008962.1-201ENST00000605729 304 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC009570.1-201ENST00000609599 745 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 MIR7844-201ENST00000616161 122 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC068831.7-201ENST00000616954 363 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AL603755.1-201ENST00000619504 163 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC012150.2-201ENST00000621300 544 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AF246928.1-201ENST00000623768 87 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC008568.2-201ENST00000623862 2313 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 FAM35BP-202ENST00000497389 3337 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 GABRG2-229ENST00000641017 3628 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 RNY4P24-201ENST00000362735 96 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 SNORA23-201ENST00000365128 182 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 SNORA36C-201ENST00000384289 132 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 CCNG1P1-201ENST00000406783 885 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-920P-201ENST00000410926 92 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC018630.2-202ENST00000422992 927 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC008850.1-201ENST00000427546 362 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AL390023.1-201ENST00000428836 262 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AL365184.2-201ENST00000431139 435 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC109583.1-201ENST00000432156 268 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 SNRPEP4-201ENST00000435815 279 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AL512286.1-201ENST00000439244 400 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 RPL17P49-201ENST00000443728 411 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 COX6CP2-201ENST00000444980 225 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AL359385.1-201ENST00000456509 365 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 MTCO1P42-201ENST00000457379 726 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC096576.1-201ENST00000489014 359 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 RPF2P2-201ENST00000504693 896 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-840P-201ENST00000517275 65 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC090888.1-201ENST00000561335 1141 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC011260.1-201ENST00000578420 472 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 TPMTP1-201ENST00000592307 737 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC093838.1-201ENST00000613014 469 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC002076.2-201ENST00000617362 122 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 AC019226.2-201ENST00000625973 424 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 API5P2-201ENST00000397055 1498 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 CUL1P1-201ENST00000509510 2425 ntBASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
C9orf40Q8IXQ3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 SDAD1P2-201ENST00000441308 2028 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-223P-201ENST00000362830 107 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 SNORA80A-201ENST00000363922 136 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 MIR19A-201ENST00000384878 82 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 FAT1P1-201ENST00000406588 507 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AL592148.1-201ENST00000413568 445 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 AL451074.5-201ENST00000415894 435 ntBASIC2.61□□□□□ -1.99
C9orf40Q8IXQ3 UBE2FP1-201ENST00000416536 447 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms