Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC117470.1-201ENST00000381974 330 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 RNU6-26P-201ENST00000383985 107 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 Y_RNA.557-201ENST00000384680 107 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AL391417.1-201ENST00000404100 426 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 MIR1302-3-201ENST00000408128 138 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 RN7SKP16-201ENST00000410180 299 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AC073063.1-201ENST00000434352 607 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 FABP5P14-201ENST00000437273 393 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 ELOCP24-201ENST00000456370 334 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 RNA5SP471-201ENST00000516971 106 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AC040958.1-201ENST00000561102 201 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AC093249.4-201ENST00000564755 259 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 AC083806.3-201ENST00000614016 455 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 ZNF519P1-201ENST00000449011 1626 ntBASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
NPAS4Q8IUM7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC125257.1-201ENST00000560400 2930 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 Y_RNA.33-201ENST00000362591 102 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 Y_RNA.149-201ENST00000363558 117 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 Y_RNA.158-201ENST00000363651 101 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 RNU6-371P-201ENST00000364283 108 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 Y_RNA.482-201ENST00000384377 111 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 COX5BP7-201ENST00000414780 274 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC091390.3-201ENST00000426478 338 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC004975.1-201ENST00000428733 208 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC007919.1-201ENST00000429380 217 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 VDAC1P3-201ENST00000434069 851 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AL359672.1-201ENST00000442302 409 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 HSFY6P-201ENST00000445573 403 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 CECR9-201ENST00000453421 199 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 RNU7-138P-201ENST00000459479 64 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC011276.1-201ENST00000469688 323 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 RPL36AP41-201ENST00000493820 306 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 SNORA70.16-201ENST00000516390 95 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 RNU6-1332P-201ENST00000516666 104 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC105031.1-201ENST00000518550 476 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 AC023575.1-201ENST00000580510 358 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 MIR6716-201ENST00000613413 80 ntBASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NPAS4Q8IUM7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RAD17P1-201ENST00000418130 2042 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 USP8P1-201ENST00000494673 3183 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 OR14L1P-202ENST00000641545 3009 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AL022322.2-201ENST00000624072 20397 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 Y_RNA.5-201ENST00000362334 102 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RNA5SP509-201ENST00000364577 119 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RNU6-601P-201ENST00000384540 107 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 MRPL42P3-201ENST00000401492 326 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 PPIAP31-201ENST00000405422 495 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RNU2-33P-201ENST00000410344 192 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RNU6-293P-201ENST00000411259 106 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AL035666.1-201ENST00000446195 348 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC109327.1-201ENST00000471666 403 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC117503.1-201ENST00000472241 394 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC073073.1-201ENST00000493920 463 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC015795.1-201ENST00000513669 327 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC097486.1-201ENST00000515331 210 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RNA5SP464-201ENST00000516251 108 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RNU6-764P-201ENST00000516396 105 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RNU2-58P-201ENST00000516403 183 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 RN7SKP21-201ENST00000516503 220 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC009902.1-201ENST00000519351 183 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AL161670.1-201ENST00000554348 137 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AP005019.3-201ENST00000620418 560 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 AL031601.2-202ENST00000622650 282 ntBASIC5.09□□□□□ -1.59
NPAS4Q8IUM7 Z69720.2-201ENST00000624755 279 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms