Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC099548.1-201ENST00000421443 426 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC006366.1-201ENST00000422002 759 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC244035.1-201ENST00000430042 390 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 MED14P1-201ENST00000430517 648 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC129850.1-201ENST00000436203 508 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 BNIP3P2-201ENST00000441221 577 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 MTND1P30-201ENST00000441241 901 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 TRIM60P18-201ENST00000441518 828 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC020550.1-201ENST00000447385 163 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AL160314.1-201ENST00000490836 438 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 RN7SL504P-201ENST00000494496 287 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 RPF2P2-201ENST00000504693 896 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 RNA5SP290-201ENST00000517133 127 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC245166.1-201ENST00000521012 253 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC100870.1-201ENST00000522035 505 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 MIR3146-201ENST00000580367 79 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 DPPA3P3-201ENST00000603842 430 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 AC004852.3-201ENST00000614131 326 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 MTND1P37-201ENST00000636562 264 ntBASIC3.32□□□□□ -1.88
PRPF39Q86UA1 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.32□□□□□ -1.88
PRPF39Q86UA1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 RNU6-553P-201ENST00000364047 96 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 RNU6-270P-201ENST00000364131 105 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 RNU6-140P-201ENST00000384566 108 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 MIR128-1-201ENST00000384921 82 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 SNORA48.5-201ENST00000391143 135 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AL357075.1-201ENST00000404107 726 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 RPL7P25-201ENST00000404151 721 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 RNU4-72P-201ENST00000410754 173 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC007899.1-201ENST00000412776 775 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC063979.1-201ENST00000415539 377 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AL365203.2-201ENST00000423444 196 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AL353777.1-201ENST00000425552 326 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 CST9LP2-201ENST00000437612 320 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 Z75741.1-201ENST00000446793 314 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC093392.2-201ENST00000450682 337 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 RPS29P12-201ENST00000460178 152 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC233702.1-201ENST00000482905 502 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC098862.1-201ENST00000504991 413 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC010265.1-201ENST00000513509 211 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 RNU6-201P-201ENST00000517100 61 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 SNORA31.21-201ENST00000517180 77 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 MIR5004-201ENST00000579078 107 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC011471.1-201ENST00000585766 187 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AF131215.7-201ENST00000602443 707 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC105129.3-201ENST00000605455 485 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC107294.3-201ENST00000609211 526 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF39Q86UA1 MAPK10-322ENST00000641485 4530 ntBASIC3.31□□□□□ -1.88
PRPF39Q86UA1 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 Y_RNA.169-201ENST00000363745 96 ntBASIC3.3□□□□□ -1.88
PRPF39Q86UA1 RNY3P13-201ENST00000365542 102 ntBASIC3.3□□□□□ -1.88
PRPF39Q86UA1 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 MIR634-201ENST00000385208 97 ntBASIC3.3□□□□□ -1.88
PRPF39Q86UA1 RPL7P8-201ENST00000411964 730 ntBASIC3.3□□□□□ -1.88
PRPF39Q86UA1 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.3□□□□□ -1.88
PRPF39Q86UA1 AC092047.1-201ENST00000424997 240 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms