Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 Y_RNA.274-201ENST00000364714 101 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AL357078.2-201ENST00000416486 427 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC096772.1-201ENST00000609146 564 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 SNORA1.3-201ENST00000384676 136 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AIMP1P2-201ENST00000425294 312 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AL445305.1-201ENST00000432577 575 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 TPMTP4-201ENST00000450749 678 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 AL590099.1-201ENST00000615276 138 ntBASIC0.88□□□□□ -2.27
CSMD3Q7Z407 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.88□□□□□ -2.27
CSMD3Q7Z407 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 RNU1-148P-201ENST00000384472 162 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 HMGB3P31-201ENST00000413333 595 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AL513343.1-201ENST00000451818 792 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC023424.2-201ENST00000493479 777 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AL163153.1-201ENST00000554223 283 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 HSPE1P3-201ENST00000559254 309 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 MKKS-204ENST00000639674 192 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 BX682237.1-201ENST00000415016 335 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 MIR514B-201ENST00000516774 80 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC109635.4-202ENST00000531666 412 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AP003072.4-201ENST00000624580 310 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 ZNF734P-201ENST00000419494 1534 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 Y_RNA.303-201ENST00000364998 94 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 RNA5SP363-201ENST00000365072 115 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 EBAG9P1-201ENST00000418955 543 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 RPL21P32-201ENST00000419877 477 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC233728.2-201ENST00000425348 757 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC010301.1-201ENST00000473936 355 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 RNA5SP471-201ENST00000516971 106 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC090821.2-201ENST00000523552 176 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 MTCO1P47-201ENST00000523889 1271 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC007115.1-201ENST00000546853 234 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 RPS15AP11-201ENST00000594193 385 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AL109653.1-201ENST00000603091 248 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AL020996.3-201ENST00000606617 222 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC098657.3-201ENST00000620434 263 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 AC116618.1-201ENST00000634617 774 ntBASIC0.87□□□□□ -2.27
CSMD3Q7Z407 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC0.87□□□□□ -2.27
CSMD3Q7Z407 RN7SKP51-201ENST00000410781 304 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC007560.1-201ENST00000426912 237 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 IFNA20P-201ENST00000436840 528 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 MTND2P8-201ENST00000450555 1025 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 RPS23P3-201ENST00000470993 430 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 RPL21P131-201ENST00000497298 483 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC125611.2-201ENST00000551907 647 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 MIR2909-201ENST00000617113 69 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 SNHG22-203ENST00000617833 660 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 RNA5SP489-201ENST00000410986 109 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 Z75741.2-201ENST00000417272 1167 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 Y_RNA.675-201ENST00000516389 149 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 MTCO3P24-201ENST00000572729 782 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 CBX3P2-202ENST00000583365 535 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CSMD3Q7Z407 OR1L1-202ENST00000373686 1083 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 RNU4-52P-201ENST00000384209 138 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 U3.40-201ENST00000408706 208 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AL358176.2-201ENST00000425769 204 ntBASIC0.86□□□□□ -2.27
CSMD3Q7Z407 AL691517.1-201ENST00000440833 1235 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms