Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 AC233263.6-201ENST00000631132 1963 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 ZNF72P-201ENST00000425869 1908 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 OR4G2P-202ENST00000641004 1759 ntBASIC4.58□□□□□ -1.68
LRFN4Q6PJG9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 Y_RNA.350-201ENST00000365409 98 ntBASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 RPS3AP46-201ENST00000448352 682 ntBASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AL583843.1-201ENST00000456070 346 ntBASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 BNIP3P1-201ENST00000547295 580 ntBASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AC004584.2-201ENST00000570407 410 ntBASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
LRFN4Q6PJG9 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AL356489.2-201ENST00000566968 3528 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 RPL9P7-201ENST00000330965 580 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 OR56A5-201ENST00000340110 738 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 RNA5SP235-201ENST00000365411 114 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 SAR1AP2-201ENST00000392696 594 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AL035079.1-201ENST00000405210 287 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 DUTP5-201ENST00000406790 469 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 RNU6-1025P-201ENST00000410629 104 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC104333.2-201ENST00000422630 192 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 EIF4EP2-201ENST00000422816 654 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AL513043.1-201ENST00000439124 535 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 RNU6-1132P-201ENST00000459214 107 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 RPL9P9-202ENST00000466501 579 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC009127.1-201ENST00000467090 155 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 RPS20P22-201ENST00000473700 357 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 HMGN2P13-201ENST00000476476 274 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 SNORA25.11-201ENST00000515935 105 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 SCARNA15.2-201ENST00000516409 127 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AP004371.1-201ENST00000525240 214 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 ATP5F1P5-201ENST00000526403 760 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC007225.2-201ENST00000562529 256 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 MIR4489-201ENST00000578869 62 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 MIR6886-201ENST00000619864 61 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC078938.1-201ENST00000620993 318 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC103858.2-201ENST00000621471 543 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 MIR6715B-201ENST00000637172 77 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 ZNF299P-201ENST00000406845 1804 ntBASIC4.56□□□□□ -1.68
LRFN4Q6PJG9 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms