Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC015813.6-201ENST00000624409 5808 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-821P-201ENST00000390995 107 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-954P-201ENST00000411355 107 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RPL31P12-201ENST00000422587 358 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 MTND1P17-201ENST00000448961 204 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RPS15AP27-201ENST00000449183 343 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 MTCO3P10-201ENST00000455912 772 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RPL23AP2-201ENST00000471227 466 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RBBP4P6-201ENST00000508098 202 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC099522.1-202ENST00000514718 367 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 SNORD116-26-201ENST00000516006 96 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-976P-201ENST00000516086 111 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RN7SKP295-201ENST00000517264 153 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 HMGB1P19-201ENST00000517578 577 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC100870.1-201ENST00000522035 505 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 PTP4A1P6-201ENST00000531034 478 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC006254.3-201ENST00000603353 884 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AL138889.2-201ENST00000603883 242 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AL160290.3-201ENST00000604869 165 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC010201.1-201ENST00000605051 540 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 ATP1B3P1-201ENST00000605365 821 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC099669.2-201ENST00000616549 437 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC103705.1-201ENST00000619013 241 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 DDX10P1-201ENST00000448545 1933 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 AL133243.3-201ENST00000617415 3004 ntBASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF40BQ6NWY9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AL450326.2-201ENST00000421913 1962 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC090971.4-201ENST00000560291 1800 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 Y_RNA.112-201ENST00000363250 102 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 Y_RNA.133-201ENST00000363428 110 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 SNORD46.1-201ENST00000364139 104 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 Y_RNA.212-201ENST00000364177 102 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 SNORD116-11-201ENST00000383882 92 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-574P-201ENST00000384265 107 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 RNU6-1127P-201ENST00000384580 107 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 MIR450B-201ENST00000401182 78 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AL139397.2-201ENST00000404529 772 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 Y_RNA.605-201ENST00000410577 105 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 RPL7P10-201ENST00000417407 739 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 PDSS1P1-201ENST00000422953 1114 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AL358176.2-201ENST00000425769 204 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AL445584.1-201ENST00000431451 330 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 RPL21P112-201ENST00000434403 463 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AL162388.1-201ENST00000450912 352 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 RPL21P93-201ENST00000480465 489 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC108022.1-201ENST00000493466 478 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 RN7SL812P-201ENST00000493791 279 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AL592156.1-201ENST00000508758 304 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AP000654.2-201ENST00000605633 586 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC083806.3-201ENST00000614016 455 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC010378.1-201ENST00000619270 362 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AP001273.1-201ENST00000624493 3152 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 AC103710.2-202ENST00000641454 2853 ntBASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
PRPF40BQ6NWY9 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PRPF40BQ6NWY9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms