Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.97□□□□□ -2.25
RIF1Q5UIP0 MFSD8-213ENST00000641134 1327 ntBASIC0.97□□□□□ -2.25
RIF1Q5UIP0 RNU6-1235P-201ENST00000384559 107 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 PTP4A1P1-201ENST00000420539 515 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AL354685.2-201ENST00000448218 1447 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 RNU6-498P-201ENST00000459468 107 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AC005912.1-201ENST00000495392 255 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AC021755.4-201ENST00000616620 456 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 uc_338.20-201ENST00000621563 178 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 Y_RNA.280-201ENST00000364765 112 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AL356057.2-201ENST00000403318 432 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 MIR1285-1-201ENST00000408593 84 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 UBE2V2P1-201ENST00000434717 398 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 MIR514B-201ENST00000516774 80 ntBASIC0.96□□□□□ -2.26
RIF1Q5UIP0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
RIF1Q5UIP0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 HMGB3P31-201ENST00000413333 595 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC109780.2-201ENST00000413467 845 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AL121601.2-201ENST00000438019 707 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 IPO7P1-201ENST00000442031 636 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 GDI2P2-201ENST00000445131 608 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 HMGB3P30-201ENST00000457863 606 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AP005597.4-201ENST00000526762 229 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC023050.2-201ENST00000544968 387 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 NOP56P3-201ENST00000549457 385 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC025918.2-201ENST00000558683 763 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC068338.1-201ENST00000565567 176 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC006270.3-201ENST00000605967 1036 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC009229.3-201ENST00000608056 282 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC010889.1-201ENST00000566193 2666 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 MTND2P16-201ENST00000419987 799 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AL136380.1-201ENST00000447970 162 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC104806.1-201ENST00000508720 308 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 CYCSP23-201ENST00000519781 313 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 AC092140.2-201ENST00000618027 521 ntBASIC0.95□□□□□ -2.26
RIF1Q5UIP0 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 RNU6-72P-201ENST00000384285 79 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 PSMA2P3-201ENST00000429685 675 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AC022431.1-201ENST00000450941 438 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 RNA5SP82-201ENST00000516707 92 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AC013244.3-201ENST00000605614 388 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 MIR2909-201ENST00000617113 69 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 XKRY2-202ENST00000623874 1581 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 XKRY-202ENST00000624960 1581 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AC244636.1-201ENST00000421152 228 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 MTND2P9-201ENST00000422293 931 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AC244035.1-201ENST00000430042 390 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 PGBD4P3-201ENST00000440731 581 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AC243772.1-201ENST00000451620 410 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 RNA5SP364-201ENST00000516938 78 ntBASIC0.94□□□□□ -2.26
RIF1Q5UIP0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
RIF1Q5UIP0 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC092447.6-201ENST00000414578 210 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 RPL21P90-201ENST00000415692 466 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC233728.2-201ENST00000425348 757 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AL627224.1-201ENST00000448334 444 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 ATG12P2-201ENST00000456830 416 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC091925.1-201ENST00000623204 462 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 RNA5SP393-201ENST00000363423 117 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC000111.3-201ENST00000433478 193 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AP000949.1-201ENST00000438328 629 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC114322.1-201ENST00000506771 926 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC067942.3-201ENST00000512025 362 ntBASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
RIF1Q5UIP0 AC080100.1-201ENST00000624239 5356 ntBASIC0.92□□□□□ -2.26
RIF1Q5UIP0 SUMO2P12-201ENST00000405924 140 ntBASIC0.92□□□□□ -2.26
RIF1Q5UIP0 FCF1P2-201ENST00000415284 583 ntBASIC0.92□□□□□ -2.26
RIF1Q5UIP0 Z75741.2-201ENST00000417272 1167 ntBASIC0.92□□□□□ -2.26
RIF1Q5UIP0 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms