Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AIMP1P2-201ENST00000425294 312 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AL596276.1-201ENST00000434465 418 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 RPL7P18-201ENST00000478965 734 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 KATNBL1P4-201ENST00000503545 918 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AL109653.1-201ENST00000603091 248 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 SDR42E1P2-201ENST00000614861 481 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 MIR2909-201ENST00000617113 69 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 SDR42E1P4-201ENST00000620894 481 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 XKRY2-202ENST00000623874 1581 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 XKRY-202ENST00000624960 1581 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 Y_RNA.458-201ENST00000384240 102 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 MIR193B-201ENST00000384907 83 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 EZH2P1-201ENST00000431167 291 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 NPM1P52-201ENST00000518264 846 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AC022880.1-201ENST00000534017 973 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 RPS20P15-201ENST00000412792 311 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 UBE2V1P6-201ENST00000430840 422 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 UBE2L4-201ENST00000587688 464 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 AC123912.5-201ENST00000605470 343 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.74□□□□□ -2.29
VPS13DQ5THJ4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC004941.2-201ENST00000427009 228 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 BZW1P2-201ENST00000473537 826 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RPS15AP34-201ENST00000487776 387 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC020699.1-201ENST00000505161 445 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC130650.2-201ENST00000618736 2403 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RNU6-492P-201ENST00000363035 104 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC015922.2-201ENST00000435593 184 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RNA5SP121-201ENST00000516537 101 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC007229.1-201ENST00000590455 412 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC099654.7-201ENST00000635788 2127 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 SNORA51.2-201ENST00000364595 132 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RNU6-203P-201ENST00000384038 104 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RN7SKP200-201ENST00000410564 320 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 SNORD56-201ENST00000413522 71 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 HSFY3P-201ENST00000444242 1191 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RNA5SP233-201ENST00000459153 113 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AL390862.1-201ENST00000635467 1469 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RNA5SP62-201ENST00000363457 110 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 MIR17-201ENST00000385012 84 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 MTCO1P40-201ENST00000574371 625 ntBASIC0.73□□□□□ -2.29
VPS13DQ5THJ4 RNA5SP363-201ENST00000365072 115 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 MIR513A1-201ENST00000385138 129 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC016769.3-201ENST00000396562 315 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 NEFMP1-201ENST00000443423 1006 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AL135752.1-201ENST00000479477 471 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC026801.1-201ENST00000497178 464 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 RNA5SP471-201ENST00000516971 106 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 CASP1P1-201ENST00000526345 212 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 7SK.7-201ENST00000603504 247 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC009229.3-201ENST00000608056 282 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 RNU2-71P-201ENST00000411395 189 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AP005597.4-201ENST00000526762 229 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 RNU4-72P-201ENST00000410754 173 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 RPL30P4-201ENST00000429309 333 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 VN1R108P-201ENST00000431580 830 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 HMGB3P10-201ENST00000434734 572 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC004908.2-201ENST00000609090 574 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 AC245884.12-201ENST00000615364 59 ntBASIC0.72□□□□□ -2.29
VPS13DQ5THJ4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms