Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC090572.1-201ENST00000519251 160 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC034105.3-201ENST00000565294 442 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 RN7SL703P-201ENST00000578485 302 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC053481.4-201ENST00000583164 216 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC004223.2-201ENST00000590309 544 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC034102.8-201ENST00000615146 484 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC136475.10-201ENST00000620253 385 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AL589994.2-201ENST00000621124 579 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 PLCE1P1-201ENST00000622094 305 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC007998.5-201ENST00000622938 237 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 AC068880.5-201ENST00000624331 290 ntBASIC3.78□□□□□ -1.8
CCDC38Q502W7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.78□□□□□ -1.8
CCDC38Q502W7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC38Q502W7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC38Q502W7 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC38Q502W7 SNORA73.2-201ENST00000364946 201 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 SMIM11P1-201ENST00000369586 178 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 MIR325-201ENST00000385260 98 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AL136116.1-201ENST00000403591 381 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AL445189.1-201ENST00000405722 338 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 RNA5SP293-201ENST00000410527 113 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC010975.2-201ENST00000427781 588 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC007919.1-201ENST00000429380 217 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AL589823.1-201ENST00000429577 183 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 RPL23AP69-201ENST00000431134 458 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AL358934.1-201ENST00000432346 324 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 NEK4P1-201ENST00000433383 879 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AL512844.2-201ENST00000433990 593 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 C1DP4-201ENST00000455429 424 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 RNU6-420P-201ENST00000458780 107 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC012181.1-201ENST00000479895 423 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 RPL32P34-201ENST00000486380 400 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AL160314.1-201ENST00000490836 438 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 FCF1P3-201ENST00000496394 590 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC105252.1-201ENST00000503089 286 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 SCARNA24.1-201ENST00000516465 137 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 TGIF1P1-201ENST00000558095 802 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC074050.1-201ENST00000563247 211 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC009063.1-201ENST00000563342 702 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC037471.2-201ENST00000564941 598 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 MIR4286-201ENST00000580651 93 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC104763.2-201ENST00000604179 382 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC007619.2-201ENST00000605743 379 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 AL354798.1-201ENST00000622505 329 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.77□□□□□ -1.81
CCDC38Q502W7 OR5H6-203ENST00000642105 978 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC38Q502W7 FAM35BP-202ENST00000497389 3337 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCDC38Q502W7 AC092447.7-201ENST00000422212 1621 ntBASIC3.77□□□□□ -1.81
CCDC38Q502W7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 MTND5P27-201ENST00000428871 1720 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 RNU6-1097P-201ENST00000363586 107 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 RNU6-14P-201ENST00000384630 106 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 SNORA3.3-201ENST00000408712 125 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC38Q502W7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 AC092047.1-201ENST00000424997 240 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 GPR143P-201ENST00000434155 205 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 RPL36AP6-201ENST00000435770 321 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 BNIP3P2-201ENST00000441221 577 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 PIGFP3-201ENST00000441918 722 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AC079781.2-201ENST00000446424 169 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC38Q502W7 RPS3AP17-201ENST00000472594 777 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AL135752.1-201ENST00000479477 471 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 AL358832.1-201ENST00000497800 389 ntBASIC3.76□□□□□ -1.81
CCDC38Q502W7 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms