Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-670P-201ENST00000364312 104 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 RNA5SP88-201ENST00000365560 109 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 TAF9BP2-201ENST00000400856 499 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL033519.2-201ENST00000403958 392 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AC074117.2-201ENST00000417130 397 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL139415.2-201ENST00000431968 163 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL512844.2-201ENST00000433990 593 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 TAAR7P-201ENST00000436141 242 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 RPS26P30-201ENST00000443431 335 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AC021146.2-201ENST00000504736 556 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 CBX3P2-202ENST00000583365 535 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 SEPT7P9-203ENST00000604116 343 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AL109659.3-201ENST00000624985 950 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 MIR7157-201ENST00000635801 60 ntBASIC1.52□□□□□ -2.17
CCDC58Q4VC31 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 RNU6-1083P-201ENST00000384022 107 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 RNU6-882P-201ENST00000391025 103 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 VTA1P1-201ENST00000414044 866 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AC244636.1-201ENST00000421152 228 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 RPL12P25-201ENST00000455592 494 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 RNU6-1282P-201ENST00000516735 96 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 OR4K8P-201ENST00000578842 1048 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AC124283.4-201ENST00000581815 456 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AL021997.1-201ENST00000605757 193 ntBASIC1.51□□□□□ -2.17
CCDC58Q4VC31 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC58Q4VC31 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC025263.3-201ENST00000622965 1396 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 RNU6-1155P-201ENST00000363554 107 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 RNU6-272P-201ENST00000411028 104 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AL645568.3-201ENST00000433683 316 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC58Q4VC31 FAM103A2P-201ENST00000444122 354 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 RPS29P11-201ENST00000496507 171 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC114786.4-201ENST00000508771 728 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC008526.1-201ENST00000509149 338 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC114797.1-201ENST00000514003 728 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC58Q4VC31 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC011611.5-201ENST00000552477 578 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.5□□□□□ -2.17
CCDC58Q4VC31 MIR3126-201ENST00000577443 74 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AC008121.1-201ENST00000603244 268 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 U4atac.1-201ENST00000618345 95 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 AL590808.1-201ENST00000618696 141 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 ZNF663P-202ENST00000641770 1131 ntBASIC1.5□□□□□ -2.17
CCDC58Q4VC31 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 RNU4-82P-201ENST00000362443 140 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 MIR9-3-201ENST00000385084 90 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 SNORA11-201ENST00000408789 128 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 RPL23AP39-201ENST00000415533 405 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 OR4K6P-201ENST00000416478 897 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 SPA17P1-201ENST00000416656 452 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AL357134.1-201ENST00000445848 426 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 BMI1P1-201ENST00000445879 941 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC080013.2-201ENST00000460866 323 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC017007.3-201ENST00000479865 435 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 SCARNA3-201ENST00000517097 143 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.49□□□□□ -2.17
CCDC58Q4VC31 MIR4672-201ENST00000583126 81 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 AC105224.1-201ENST00000587055 421 ntBASIC1.49□□□□□ -2.17
CCDC58Q4VC31 NRBF2P1-201ENST00000587407 859 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms