Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC013444.2-201ENST00000603317 787 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC004987.4-201ENST00000603383 338 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AL031281.1-201ENST00000604049 488 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AP002782.1-201ENST00000623107 614 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 LRRC77P-213ENST00000637727 880 ntBASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.07□□□□□ -1.92
SHROOM1Q2M3G4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 RNA5SP354-201ENST00000391247 136 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 MTND1P32-201ENST00000433043 938 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AL592447.1-201ENST00000447592 540 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 SNORD11.1-201ENST00000459482 85 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 RNU5A-4P-201ENST00000516588 111 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AC100870.1-201ENST00000522035 505 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 MTCO1P47-201ENST00000523889 1271 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AC023538.1-201ENST00000534576 736 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AC243972.3-201ENST00000539655 198 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AC125611.2-201ENST00000551907 647 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AC090615.1-201ENST00000577519 154 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 MIR4435-1-201ENST00000582552 80 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 VN1R82P-201ENST00000601481 356 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 AC034229.4-201ENST00000607861 441 ntBASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SHROOM1Q2M3G4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AC092447.7-201ENST00000422212 1621 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 Y_RNA.234-201ENST00000364409 97 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-882P-201ENST00000391025 103 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 RNU6-193P-201ENST00000410977 107 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 RNA5SP508-201ENST00000411327 119 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 PIGPP2-201ENST00000411569 458 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 BX682237.1-201ENST00000415016 335 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AL390023.1-201ENST00000428836 262 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 OR4K11P-201ENST00000431829 904 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 THAP5P1-201ENST00000439089 262 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 Z73417.1-201ENST00000447373 778 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 ARPC3P5-201ENST00000448802 534 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 RNA5SP282-201ENST00000516355 108 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 MRPS36P3-201ENST00000519284 130 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AP003122.3-201ENST00000526316 255 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AC025588.2-201ENST00000604851 466 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AL136363.1-201ENST00000605349 337 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AP000254.1-201ENST00000609934 520 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 TUG1_1.1-201ENST00000610654 145 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 TUSC7.1-201ENST00000610969 165 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AL596245.1-201ENST00000618994 362 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AL445264.1-201ENST00000621719 171 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AC023510.2-201ENST00000622162 746 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 AC103706.2-201ENST00000638080 240 ntBASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SHROOM1Q2M3G4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 RNU1-109P-201ENST00000383960 147 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 RPS4XP7-201ENST00000406274 780 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 HMGN2P35-201ENST00000412164 270 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 RPLP0P7-201ENST00000416050 667 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 HMGB1P49-201ENST00000418882 569 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 MTCO2P21-201ENST00000419780 677 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC244505.4-201ENST00000434905 287 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 SSXP5-201ENST00000443473 287 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 SNRPGP6-201ENST00000451124 220 ntBASIC3.04□□□□□ -1.92
SHROOM1Q2M3G4 RPL23AP35-201ENST00000451906 501 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms