Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.76□□□□□ -2.13
CPSF1Q10570 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.76□□□□□ -2.13
CPSF1Q10570 BNIP3P4-201ENST00000604946 565 ntBASIC1.76□□□□□ -2.13
CPSF1Q10570 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF1Q10570 AL138880.2-201ENST00000616214 239 ntBASIC1.76□□□□□ -2.13
CPSF1Q10570 MIR6076-201ENST00000617521 113 ntBASIC1.76□□□□□ -2.13
CPSF1Q10570 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.76□□□□□ -2.13
CPSF1Q10570 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.76□□□□□ -2.13
CPSF1Q10570 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF1Q10570 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CPSF1Q10570 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CPSF1Q10570 FABP5P3-201ENST00000437960 408 ntBASIC1.75□□□□□ -2.13
CPSF1Q10570 MED6P1-201ENST00000439659 713 ntBASIC1.75□□□□□ -2.13
CPSF1Q10570 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF1Q10570 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.75□□□□□ -2.13
CPSF1Q10570 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.75□□□□□ -2.13
CPSF1Q10570 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CPSF1Q10570 AL049737.1-201ENST00000413920 1403 ntBASIC1.75□□□□□ -2.13
CPSF1Q10570 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CPSF1Q10570 Y_RNA.112-201ENST00000363250 102 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 SNORA38-201ENST00000363946 132 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 RNU6-203P-201ENST00000384038 104 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 AC074117.2-201ENST00000417130 397 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 RPL21P32-201ENST00000419877 477 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF1Q10570 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF1Q10570 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF1Q10570 HMGB1P26-201ENST00000452520 628 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 snoU13.4-201ENST00000458916 104 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 AC015908.1-201ENST00000478739 476 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF1Q10570 SNORA31.20-201ENST00000517111 133 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 AC022662.1-201ENST00000580252 331 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 U73023.1-201ENST00000603134 700 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 MTCO2P22-201ENST00000603246 681 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF1Q10570 AC009902.3-201ENST00000606235 2172 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 RNA5SP252-201ENST00000391131 119 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF1Q10570 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF1Q10570 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF1Q10570 COX6CP14-201ENST00000469580 174 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 MRPS17P9-201ENST00000511924 393 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF1Q10570 AL136363.1-201ENST00000605349 337 ntBASIC1.74□□□□□ -2.13
CPSF1Q10570 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF1Q10570 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF1Q10570 ZNF519P1-201ENST00000449011 1626 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CPSF1Q10570 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CPSF1Q10570 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF1Q10570 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF1Q10570 HMGN2P18-201ENST00000450680 270 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 RNA5SP310-201ENST00000459084 116 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 snoU13.7-201ENST00000459220 104 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 AC020699.1-201ENST00000505161 445 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 AC092436.3-201ENST00000511788 257 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CPSF1Q10570 AL096840.1-201ENST00000603287 93 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.73□□□□□ -2.13
CPSF1Q10570 AC018755.4-201ENST00000619715 454 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 AC073592.7-201ENST00000623659 507 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 AP003072.5-201ENST00000623872 773 ntBASIC1.73□□□□□ -2.13
CPSF1Q10570 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF1Q10570 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.72□□□□□ -2.13
CPSF1Q10570 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.72□□□□□ -2.13
CPSF1Q10570 AC007560.1-201ENST00000426912 237 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 SETP11-201ENST00000473027 690 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 RPL30P14-201ENST00000482744 348 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF1Q10570 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF1Q10570 SETP7-201ENST00000552169 453 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.72□□□□□ -2.13
CPSF1Q10570 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.72□□□□□ -2.13
CPSF1Q10570 AC107214.2-201ENST00000608204 634 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 SDR42E1P2-201ENST00000614861 481 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 SDR42E1P4-201ENST00000620894 481 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 AC008568.2-201ENST00000623862 2313 ntBASIC1.72□□□□□ -2.13
CPSF1Q10570 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.72□□□□□ -2.13
CPSF1Q10570 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF1Q10570 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
CPSF1Q10570 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF1Q10570 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 MIR758-201ENST00000390227 88 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 RNU6-244P-201ENST00000391028 104 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 RN7SKP51-201ENST00000410781 304 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 RPS12P24-201ENST00000412619 387 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF1Q10570 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF1Q10570 AC097493.1-201ENST00000463958 372 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 RPS3AP22-201ENST00000488297 769 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 AC008885.2-201ENST00000509506 930 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF1Q10570 OR10V3P-201ENST00000525712 725 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 RN7SL622P-201ENST00000585292 275 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 AC092474.3-201ENST00000603022 568 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 AC073413.2-201ENST00000604332 360 ntBASIC1.71□□□□□ -2.14
CPSF1Q10570 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms