Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.8□□□□□ -2.12
H3F3AP84243 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.8□□□□□ -2.12
H3F3AP84243 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.8□□□□□ -2.12
H3F3AP84243 RNU5F-8P-201ENST00000515941 111 ntBASIC1.8□□□□□ -2.12
H3F3AP84243 SNORA48.10-201ENST00000516965 160 ntBASIC1.8□□□□□ -2.12
H3F3AP84243 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
H3F3AP84243 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.8□□□□□ -2.12
H3F3AP84243 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.8□□□□□ -2.12
H3F3AP84243 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.8□□□□□ -2.12
H3F3AP84243 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.8□□□□□ -2.12
H3F3AP84243 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.8□□□□□ -2.12
H3F3AP84243 RMST_10.1-201ENST00000616309 154 ntBASIC1.8□□□□□ -2.12
H3F3AP84243 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.8□□□□□ -2.12
H3F3AP84243 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
H3F3AP84243 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AL139098.1-201ENST00000407291 389 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 RNU2-49P-201ENST00000410666 184 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.79□□□□□ -2.12
H3F3AP84243 UBE2V2P3-201ENST00000433562 437 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.79□□□□□ -2.12
H3F3AP84243 OR10R1P-201ENST00000441524 1141 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.79□□□□□ -2.12
H3F3AP84243 RPL23AP7-203ENST00000449021 469 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.79□□□□□ -2.12
H3F3AP84243 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.79□□□□□ -2.12
H3F3AP84243 LARP1BP2-201ENST00000486594 519 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 COX7A2P2-201ENST00000505291 250 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AC048346.1-201ENST00000510247 144 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.79□□□□□ -2.12
H3F3AP84243 AC233266.2-201ENST00000567067 528 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 MIR5571-201ENST00000577998 113 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 MIR3935-201ENST00000583472 104 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.79□□□□□ -2.12
H3F3AP84243 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.79□□□□□ -2.12
H3F3AP84243 AC009314.1-201ENST00000603871 304 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AC008498.1-201ENST00000613012 531 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.79□□□□□ -2.12
H3F3AP84243 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.79□□□□□ -2.12
H3F3AP84243 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
H3F3AP84243 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.78□□□□□ -2.12
H3F3AP84243 CENPCP1-201ENST00000533085 2578 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
H3F3AP84243 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
H3F3AP84243 AC010329.5-201ENST00000623497 2174 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 OR4G2P-202ENST00000641004 1759 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 RNU6-619P-201ENST00000365146 108 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 SNORA46.1-201ENST00000391069 153 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AL356379.1-201ENST00000414105 126 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 FCF1P2-201ENST00000415284 583 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.78□□□□□ -2.12
H3F3AP84243 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.78□□□□□ -2.12
H3F3AP84243 MTND4LP14-201ENST00000429447 288 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
H3F3AP84243 MTND2P24-201ENST00000453434 806 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 RN7SL429P-201ENST00000479090 223 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 RN7SL489P-201ENST00000486185 223 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 RN7SL327P-201ENST00000488659 223 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.78□□□□□ -2.12
H3F3AP84243 AC022483.1-201ENST00000514020 567 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.78□□□□□ -2.12
H3F3AP84243 CYCSP26-201ENST00000534107 320 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AC124947.2-202ENST00000552735 133 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AL138976.2-201ENST00000563989 694 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.78□□□□□ -2.12
H3F3AP84243 MIR3199-1-201ENST00000582434 88 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.78□□□□□ -2.12
H3F3AP84243 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.78□□□□□ -2.12
H3F3AP84243 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.78□□□□□ -2.12
H3F3AP84243 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 Y_RNA.783-201ENST00000613546 102 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 RN7SL853P-201ENST00000617250 223 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AL445493.3-201ENST00000619568 477 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 AC106730.3-201ENST00000624568 641 ntBASIC1.78□□□□□ -2.12
H3F3AP84243 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.78□□□□□ -2.13
H3F3AP84243 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
H3F3AP84243 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
H3F3AP84243 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.77□□□□□ -2.13
H3F3AP84243 AC104454.1-201ENST00000421341 1401 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 RNU6-251P-201ENST00000363235 104 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 RNA5SP88-201ENST00000365560 109 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 RNA5SP338-201ENST00000410495 85 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 AC023141.4-201ENST00000412031 328 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.77□□□□□ -2.13
H3F3AP84243 AL109913.1-201ENST00000421173 514 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 AL590623.1-201ENST00000427864 105 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.77□□□□□ -2.13
H3F3AP84243 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.77□□□□□ -2.13
H3F3AP84243 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.77□□□□□ -2.13
H3F3AP84243 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
H3F3AP84243 RPL32P14-201ENST00000463196 378 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 MRPS17P3-201ENST00000465453 385 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.77□□□□□ -2.13
H3F3AP84243 MIR514B-201ENST00000516774 80 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 AC103833.1-201ENST00000517442 172 ntBASIC1.77□□□□□ -2.13
H3F3AP84243 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.77□□□□□ -2.13
H3F3AP84243 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.77□□□□□ -2.13
H3F3AP84243 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.77□□□□□ -2.13
H3F3AP84243 MTND4LP5-201ENST00000605152 292 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms