Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
CCL20P78556 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CCL20P78556 AL359851.1-201ENST00000569460 4997 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AC009487.4-201ENST00000624969 3585 ntBASIC1.57□□□□□ -2.16
CCL20P78556 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCL20P78556 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.57□□□□□ -2.16
CCL20P78556 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.57□□□□□ -2.16
CCL20P78556 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.57□□□□□ -2.16
CCL20P78556 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL20P78556 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL20P78556 GPM6BP3-201ENST00000442797 145 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.57□□□□□ -2.16
CCL20P78556 PSPHP1-201ENST00000450062 261 ntBASIC1.57□□□□□ -2.16
CCL20P78556 MTCO3P11-201ENST00000455103 774 ntBASIC1.57□□□□□ -2.16
CCL20P78556 FTH1P2-201ENST00000466086 412 ntBASIC1.57□□□□□ -2.16
CCL20P78556 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.57□□□□□ -2.16
CCL20P78556 AC068781.1-201ENST00000488231 618 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.57□□□□□ -2.16
CCL20P78556 RNU6-528P-201ENST00000516926 100 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL20P78556 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL20P78556 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.57□□□□□ -2.16
CCL20P78556 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.57□□□□□ -2.16
CCL20P78556 AC008121.1-201ENST00000603244 268 ntBASIC1.57□□□□□ -2.16
CCL20P78556 RPAP2P1-201ENST00000603626 1168 ntBASIC1.57□□□□□ -2.16
CCL20P78556 SNRPGP19-201ENST00000603826 189 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AL035411.2-201ENST00000604022 421 ntBASIC1.57□□□□□ -2.16
CCL20P78556 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.57□□□□□ -2.16
CCL20P78556 MIR6817-201ENST00000615588 66 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AL603758.1-201ENST00000618654 241 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AC084824.4-201ENST00000620106 731 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AC073592.7-201ENST00000623659 507 ntBASIC1.57□□□□□ -2.16
CCL20P78556 AC025048.6-202ENST00000627667 438 ntBASIC1.57□□□□□ -2.16
CCL20P78556 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCL20P78556 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCL20P78556 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.57□□□□□ -2.16
CCL20P78556 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
CCL20P78556 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.57□□□□□ -2.16
CCL20P78556 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.57□□□□□ -2.16
CCL20P78556 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCL20P78556 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCL20P78556 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCL20P78556 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.56□□□□□ -2.16
CCL20P78556 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCL20P78556 OR5J1P-201ENST00000313544 939 ntBASIC1.56□□□□□ -2.16
CCL20P78556 RNU6-525P-201ENST00000363685 104 ntBASIC1.56□□□□□ -2.16
CCL20P78556 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCL20P78556 XGY1-201ENST00000381172 446 ntBASIC1.56□□□□□ -2.16
CCL20P78556 U6.112-201ENST00000384129 70 ntBASIC1.56□□□□□ -2.16
CCL20P78556 MIR196B-201ENST00000384852 84 ntBASIC1.56□□□□□ -2.16
CCL20P78556 MIR17-201ENST00000385012 84 ntBASIC1.56□□□□□ -2.16
CCL20P78556 MIR888-201ENST00000401186 77 ntBASIC1.56□□□□□ -2.16
CCL20P78556 CIR1P3-201ENST00000405137 479 ntBASIC1.56□□□□□ -2.16
CCL20P78556 RNU2-33P-201ENST00000410344 192 ntBASIC1.56□□□□□ -2.16
CCL20P78556 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AL356379.1-201ENST00000414105 126 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AC096649.2-201ENST00000416186 393 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AC009963.1-201ENST00000417265 157 ntBASIC1.56□□□□□ -2.16
CCL20P78556 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.56□□□□□ -2.16
CCL20P78556 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.56□□□□□ -2.16
CCL20P78556 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.56□□□□□ -2.16
CCL20P78556 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.56□□□□□ -2.16
CCL20P78556 MED14P1-201ENST00000430517 648 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AC124916.1-201ENST00000444020 547 ntBASIC1.56□□□□□ -2.16
CCL20P78556 RPL39P6-201ENST00000448289 150 ntBASIC1.56□□□□□ -2.16
CCL20P78556 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.56□□□□□ -2.16
CCL20P78556 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.56□□□□□ -2.16
CCL20P78556 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.56□□□□□ -2.16
CCL20P78556 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.56□□□□□ -2.16
CCL20P78556 SETP6-201ENST00000479329 568 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.56□□□□□ -2.16
CCL20P78556 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCL20P78556 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.56□□□□□ -2.16
CCL20P78556 SNORA31.6-201ENST00000516241 130 ntBASIC1.56□□□□□ -2.16
CCL20P78556 RNA5SP281-201ENST00000516504 135 ntBASIC1.56□□□□□ -2.16
CCL20P78556 SCARNA3-201ENST00000517097 143 ntBASIC1.56□□□□□ -2.16
CCL20P78556 RNU6-840P-201ENST00000517275 65 ntBASIC1.56□□□□□ -2.16
CCL20P78556 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.56□□□□□ -2.16
CCL20P78556 AC005951.2-201ENST00000576282 495 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.56□□□□□ -2.16
CCL20P78556 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.56□□□□□ -2.16
CCL20P78556 AP000403.1-201ENST00000603349 851 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AL158211.4-201ENST00000606988 584 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AL589743.7-201ENST00000612637 233 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.56□□□□□ -2.16
CCL20P78556 MIR7157-201ENST00000635801 60 ntBASIC1.56□□□□□ -2.16
CCL20P78556 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.56□□□□□ -2.16
CCL20P78556 AC004944.1-201ENST00000517807 3059 ntBASIC1.56□□□□□ -2.16
CCL20P78556 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCL20P78556 AC131280.1-202ENST00000624067 4211 ntBASIC1.55□□□□□ -2.16
CCL20P78556 Y_RNA.126-201ENST00000363382 111 ntBASIC1.55□□□□□ -2.16
CCL20P78556 RNU5E-8P-201ENST00000363502 116 ntBASIC1.55□□□□□ -2.16
CCL20P78556 RNU6-1300P-201ENST00000391046 108 ntBASIC1.55□□□□□ -2.16
CCL20P78556 RPL23AP29-201ENST00000397284 453 ntBASIC1.55□□□□□ -2.16
CCL20P78556 Y_RNA.625-201ENST00000411256 107 ntBASIC1.55□□□□□ -2.16
CCL20P78556 RNA5SP270-201ENST00000411361 118 ntBASIC1.55□□□□□ -2.16
CCL20P78556 AL139156.1-201ENST00000412785 841 ntBASIC1.55□□□□□ -2.16
CCL20P78556 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.55□□□□□ -2.16
CCL20P78556 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.55□□□□□ -2.16
CCL20P78556 DEFB130D-201ENST00000426866 237 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms