Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.97□□□□□ -1.93
CX3CL1P78423 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CX3CL1P78423 CUL1P1-201ENST00000509510 2425 ntBASIC2.97□□□□□ -1.93
CX3CL1P78423 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CX3CL1P78423 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CX3CL1P78423 RNU6-1097P-201ENST00000363586 107 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RNU6-1103P-201ENST00000384150 107 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RNU6-74P-201ENST00000384235 107 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 MIR1-2-201ENST00000384961 85 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 PTMAP5-201ENST00000393073 333 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RPS4XP3-201ENST00000398541 413 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 FAT1P1-201ENST00000406588 507 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RNU4-55P-201ENST00000410731 137 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RN7SKP53-201ENST00000411337 315 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CX3CL1P78423 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 SDCBPP3-201ENST00000419629 891 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.96□□□□□ -1.94
CX3CL1P78423 MTATP6P16-201ENST00000434543 526 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RPS15AP9-201ENST00000439856 381 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 PIGFP3-201ENST00000441918 722 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.96□□□□□ -1.94
CX3CL1P78423 U3.44-201ENST00000458938 192 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RPL7P5-201ENST00000471472 736 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.96□□□□□ -1.94
CX3CL1P78423 RPL9P6-201ENST00000492764 598 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC023194.1-201ENST00000493084 308 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC107401.1-201ENST00000503426 685 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC026427.2-201ENST00000506228 536 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 PCBP2P3-201ENST00000509726 843 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 OR5G4P-201ENST00000525251 760 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 FAM92A1P1-201ENST00000528023 890 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 TRAV28-201ENST00000557548 323 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.96□□□□□ -1.94
CX3CL1P78423 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.96□□□□□ -1.94
CX3CL1P78423 AL391646.1-201ENST00000603860 190 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC027309.3-201ENST00000623419 351 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC009161.2-201ENST00000624626 138 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.96□□□□□ -1.94
CX3CL1P78423 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 MTND1P37-201ENST00000636562 264 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 U6.98-201ENST00000637157 84 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 AC099654.12-201ENST00000639868 649 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.96□□□□□ -1.94
CX3CL1P78423 OR5H6-203ENST00000642105 978 ntBASIC2.96□□□□□ -1.94
CX3CL1P78423 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.96□□□□□ -1.94
CX3CL1P78423 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CX3CL1P78423 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CX3CL1P78423 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 RNA5SP295-201ENST00000362655 121 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 Y_RNA.159-201ENST00000363674 87 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CX3CL1P78423 RNU6-817P-201ENST00000391083 104 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CX3CL1P78423 MTCO1P21-201ENST00000416634 589 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 BTF3L4P3-201ENST00000418879 476 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 RPL31P12-201ENST00000422587 358 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AL139247.1-201ENST00000422768 325 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 MTCO2P19-201ENST00000427513 598 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 ARF4P2-201ENST00000430209 526 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.95□□□□□ -1.94
CX3CL1P78423 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.95□□□□□ -1.94
CX3CL1P78423 RPL36AP6-201ENST00000435770 321 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 Z82210.1-201ENST00000440037 231 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 BNIP3P2-201ENST00000441221 577 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 MTND1P1-201ENST00000445453 368 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.95□□□□□ -1.94
CX3CL1P78423 AC087588.1-201ENST00000462203 316 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AL133162.1-201ENST00000463228 453 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC078785.3-201ENST00000476607 425 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 KC877373.1-201ENST00000479066 408 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 HSPD1P15-201ENST00000505573 1122 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC117522.1-201ENST00000509821 380 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.95□□□□□ -1.94
CX3CL1P78423 MTND4LP31-201ENST00000514859 294 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 RNA5SP471-201ENST00000516971 106 ntBASIC2.95□□□□□ -1.94
CX3CL1P78423 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms