Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.36□□□□□ -2.19
ABCA4P78363 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCA4P78363 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.36□□□□□ -2.19
ABCA4P78363 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA4P78363 AC025459.1-201ENST00000504072 156 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AC109464.2-201ENST00000510242 943 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 HMGB3P3-201ENST00000510526 400 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ABCA4P78363 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCA4P78363 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ABCA4P78363 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCA4P78363 NUTF2P8-201ENST00000604593 363 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AP005137.2-201ENST00000609238 400 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 MIR6840-201ENST00000611937 71 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ABCA4P78363 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ABCA4P78363 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ABCA4P78363 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
ABCA4P78363 HMGN2P38-201ENST00000423806 265 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.36□□□□□ -2.19
ABCA4P78363 USP9YP10-201ENST00000454868 628 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.36□□□□□ -2.19
ABCA4P78363 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA4P78363 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA4P78363 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA4P78363 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA4P78363 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA4P78363 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.36□□□□□ -2.19
ABCA4P78363 OR10AB1P-201ENST00000609613 938 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AL590099.1-201ENST00000615276 138 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AC027309.3-201ENST00000623419 351 ntBASIC1.36□□□□□ -2.19
ABCA4P78363 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.36□□□□□ -2.19
ABCA4P78363 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ABCA4P78363 HSPE1P11-201ENST00000339579 310 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 RNU6-1032P-201ENST00000384100 107 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 RPL36P19-201ENST00000430744 301 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ABCA4P78363 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
ABCA4P78363 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCA4P78363 MTCO3P44-201ENST00000510977 541 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 MIR514B-201ENST00000516774 80 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.35□□□□□ -2.19
ABCA4P78363 AC022634.1-201ENST00000520765 532 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.35□□□□□ -2.19
ABCA4P78363 AC007375.1-201ENST00000554513 578 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 MIR3921-201ENST00000577308 85 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 MIR3935-201ENST00000583472 104 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA4P78363 AC080078.3-201ENST00000605407 463 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AC013468.1-201ENST00000608680 598 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
ABCA4P78363 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
ABCA4P78363 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AL596028.1-201ENST00000326971 197 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 RNU6-452P-201ENST00000384406 107 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 U3.29-201ENST00000391296 212 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 RPS15AP36-201ENST00000492022 382 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.35□□□□□ -2.19
ABCA4P78363 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA4P78363 AC090666.1-201ENST00000578241 445 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AC005730.3-201ENST00000583067 366 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 MIR151B-201ENST00000584249 96 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AP001330.4-201ENST00000604350 154 ntBASIC1.35□□□□□ -2.19
ABCA4P78363 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA4P78363 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.35□□□□□ -2.19
ABCA4P78363 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.34□□□□□ -2.19
ABCA4P78363 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
ABCA4P78363 AC009902.3-201ENST00000606235 2172 ntBASIC1.34□□□□□ -2.19
ABCA4P78363 RNU6-1249P-201ENST00000363237 111 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 MIR1303-201ENST00000408625 86 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 BX510359.4-201ENST00000423750 193 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.34□□□□□ -2.2
ABCA4P78363 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.34□□□□□ -2.2
ABCA4P78363 AC078857.1-201ENST00000469870 667 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AC090096.1-201ENST00000489168 390 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AC034244.1-201ENST00000507687 207 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AP005660.1-201ENST00000522972 293 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
ABCA4P78363 AC084851.1-201ENST00000529105 249 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AL137100.2-201ENST00000555786 315 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 TRAV28-201ENST00000557548 323 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AC024614.2-201ENST00000577584 372 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.34□□□□□ -2.2
ABCA4P78363 AC104307.1-201ENST00000616142 196 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 UCA1.1-201ENST00000620952 75 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 AC006026.1-201ENST00000444025 1803 ntBASIC1.34□□□□□ -2.2
ABCA4P78363 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
ABCA4P78363 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.34□□□□□ -2.2
ABCA4P78363 AL513185.2-201ENST00000425543 193 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 TRIM60P13-201ENST00000432350 1283 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC1.33□□□□□ -2.2
ABCA4P78363 AC010099.1-201ENST00000455434 375 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.33□□□□□ -2.2
ABCA4P78363 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.33□□□□□ -2.2
ABCA4P78363 MIR3117-201ENST00000584034 78 ntBASIC1.33□□□□□ -2.2
ABCA4P78363 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
ABCA4P78363 SEPT7P9-203ENST00000604116 343 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms