Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 TIMM9P2-201ENST00000419324 266 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH6P55285 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH6P55285 GTF2IP20-201ENST00000431663 360 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH6P55285 RPS15AP7-201ENST00000439294 405 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH6P55285 AC002381.1-201ENST00000447049 280 ntBASIC2.49□□□□□ -2.01
CDH6P55285 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CDH6P55285 RPL36AP51-201ENST00000487216 318 ntBASIC2.49□□□□□ -2.01
CDH6P55285 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH6P55285 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH6P55285 MRPS36P2-201ENST00000512569 299 ntBASIC2.49□□□□□ -2.01
CDH6P55285 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.49□□□□□ -2.01
CDH6P55285 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.49□□□□□ -2.01
CDH6P55285 RPL7P20-201ENST00000520308 745 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH6P55285 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.49□□□□□ -2.01
CDH6P55285 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.49□□□□□ -2.01
CDH6P55285 AC090616.3-201ENST00000582184 217 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AL353997.4-201ENST00000586196 166 ntBASIC2.49□□□□□ -2.01
CDH6P55285 OR1M4P-201ENST00000589199 287 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AL355877.2-201ENST00000603670 358 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AL645944.1-201ENST00000603857 493 ntBASIC2.49□□□□□ -2.01
CDH6P55285 AL158163.2-201ENST00000619110 700 ntBASIC2.49□□□□□ -2.01
CDH6P55285 SCARNA15.3-201ENST00000626315 122 ntBASIC2.49□□□□□ -2.01
CDH6P55285 SCARNA4.1-201ENST00000628597 123 ntBASIC2.49□□□□□ -2.01
CDH6P55285 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.49□□□□□ -2.01
CDH6P55285 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CDH6P55285 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.49□□□□□ -2.01
CDH6P55285 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.49□□□□□ -2.01
CDH6P55285 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH6P55285 SNORA68.1-201ENST00000364537 132 ntBASIC2.48□□□□□ -2.01
CDH6P55285 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CDH6P55285 TAS2R15P-201ENST00000390674 928 ntBASIC2.48□□□□□ -2.01
CDH6P55285 U3.20-201ENST00000390909 217 ntBASIC2.48□□□□□ -2.01
CDH6P55285 RPL17P50-201ENST00000396131 546 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 MTCO2P25-201ENST00000447065 681 ntBASIC2.48□□□□□ -2.01
CDH6P55285 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH6P55285 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH6P55285 RPL30P9-201ENST00000465586 330 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC126389.1-201ENST00000477436 290 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC026436.1-201ENST00000510537 270 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.48□□□□□ -2.01
CDH6P55285 AC112673.1-201ENST00000513168 575 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH6P55285 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CDH6P55285 AL391261.3-201ENST00000557194 520 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC087465.1-201ENST00000560574 245 ntBASIC2.48□□□□□ -2.01
CDH6P55285 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 AC025281.1-201ENST00000567026 265 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 VN1R83P-201ENST00000595685 445 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.48□□□□□ -2.01
CDH6P55285 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC104763.3-201ENST00000613765 618 ntBASIC2.48□□□□□ -2.01
CDH6P55285 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CDH6P55285 AC009268.2-201ENST00000621925 457 ntBASIC2.48□□□□□ -2.01
CDH6P55285 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.48□□□□□ -2.01
CDH6P55285 AC104985.3-201ENST00000623479 597 ntBASIC2.48□□□□□ -2.01
CDH6P55285 MIR1291-201ENST00000627649 87 ntBASIC2.48□□□□□ -2.01
CDH6P55285 PABPC1P9-201ENST00000426076 1612 ntBASIC2.48□□□□□ -2.01
CDH6P55285 AC016717.2-201ENST00000609089 5141 ntBASIC2.48□□□□□ -2.01
CDH6P55285 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CDH6P55285 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AL390862.1-201ENST00000635467 1469 ntBASIC2.47□□□□□ -2.01
CDH6P55285 DDX10P1-201ENST00000448545 1933 ntBASIC2.47□□□□□ -2.01
CDH6P55285 SNORD114-30-201ENST00000364448 72 ntBASIC2.47□□□□□ -2.01
CDH6P55285 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AL449283.1-202ENST00000418249 604 ntBASIC2.47□□□□□ -2.01
CDH6P55285 ZNF863P-201ENST00000426746 417 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.47□□□□□ -2.01
CDH6P55285 ATG12P2-201ENST00000456830 416 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.47□□□□□ -2.01
CDH6P55285 RPS20P22-201ENST00000473700 357 ntBASIC2.47□□□□□ -2.01
CDH6P55285 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 AC098799.1-201ENST00000504752 800 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 SUMO2P6-201ENST00000505273 288 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AC114786.4-201ENST00000508771 728 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 AC114797.1-201ENST00000514003 728 ntBASIC2.47□□□□□ -2.01
CDH6P55285 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 SNORA19.3-201ENST00000516165 130 ntBASIC2.47□□□□□ -2.01
CDH6P55285 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CDH6P55285 AC027176.1-201ENST00000560204 514 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.47□□□□□ -2.01
CDH6P55285 AF131215.7-201ENST00000602443 707 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AC026790.2-201ENST00000606282 430 ntBASIC2.47□□□□□ -2.01
CDH6P55285 AL138955.1-201ENST00000622881 1040 ntBASIC2.47□□□□□ -2.01
CDH6P55285 CTSLP2-204ENST00000629029 392 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms